bladderbatch
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see bladderbatch.
Bladder gene expression data illustrating batch effects
Bioconductor version: 3.8
This package contains microarray gene expression data on 57 bladder samples from 5 batches. The data are used as an illustrative example for the sva package.
Author: Jeffrey T. Leek <jleek at jhsph.edu>
Maintainer: Jeffrey T. Leek <jleek at jhsph.edu>
Citation (from within R, enter
citation("bladderbatch")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("bladderbatch")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("bladderbatch")| bladderbatchTutorial | R Script | |
| Reference Manual |
Details
| biocViews | CancerData, ExperimentData, MicroarrayData |
| Version | 1.20.0 |
| License | Artistic-2.0 |
| Depends | Biobase |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | MAGeCKFlute, RUVcorr |
| Suggests Me | Harman, singleCellTK, sva |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | bladderbatch_1.20.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/bladderbatch |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/bladderbatch |
| Package Short Url | https://bioconductor.org/packages/bladderbatch/ |
| Package Downloads Report | Download Stats |