cgdv17
This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see cgdv17.
Complete Genomics Diversity Panel, chr17 on 46 individuals
Bioconductor version: 3.7
Complete Genomics Diversity Panel, chr17 on 46 individuals
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R, enter
citation("cgdv17")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("cgdv17")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cgdv17")| cgdv17: extract from Complete Genomics diversity panel | R Script | |
| Reference Manual |
Details
| biocViews | BiocViews, ExperimentData, SNPData, SequencingData |
| Version | 0.18.0 |
| License | Artistic-2.0 |
| Depends | R (>= 2.15), methods, VariantAnnotation(>= 1.15.15) |
| Imports | BiocGenerics, S4Vectors, IRanges, GenomicRanges, Biobase |
| System Requirements | |
| URL |
See More
| Suggests | parallel, GGtools, TxDb.Hsapiens.UCSC.hg19.knownGene, org.Hs.eg.db, illuminaHumanv1.db |
| Linking To | |
| Enhances | |
| Depends On Me | variants |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | cgdv17_0.18.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/cgdv17 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/cgdv17 |
| Package Short Url | https://bioconductor.org/packages/cgdv17/ |
| Package Downloads Report | Download Stats |