cleaver
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see cleaver.
Cleavage of Polypeptide Sequences
Bioconductor version: 3.7
In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html
Author: Sebastian Gibb [aut, cre]
Maintainer: Sebastian Gibb <mail at sebastiangibb.de>
Citation (from within R, enter
citation("cleaver")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("cleaver")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cleaver")| in-silico cleavage of polypeptides | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Proteomics, Software |
| Version | 1.18.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
| License | GPL (>= 3) |
| Depends | R (>= 3.0.0), methods, Biostrings(>= 1.29.8) |
| Imports | S4Vectors, IRanges |
| System Requirements | |
| URL | https://github.com/sgibb/cleaver/ |
| Bug Reports | https://github.com/sgibb/cleaver/issues/ |
See More
| Suggests | testthat (>= 0.8), knitr, BiocStyle(>= 0.0.14), BRAIN, UniProt.ws(>= 2.1.4) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | Pbase, synapter |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | cleaver_1.18.0.tar.gz |
| Windows Binary | cleaver_1.18.0.zip |
| Mac OS X 10.11 (El Capitan) | cleaver_1.18.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/cleaver |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/cleaver |
| Package Short Url | https://bioconductor.org/packages/cleaver/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.7 | Source Archive |