rpx
This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see rpx.
R Interface to the ProteomeXchange Repository
Bioconductor version: 3.6
The rpx package implements an interface to proteomics data submitted to the ProteomeXchange consortium.
Author: Laurent Gatto
Maintainer: Laurent Gatto <lg390 at cam.ac.uk>
Citation (from within R, enter
citation("rpx")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rpx")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| NEWS | Text |
Details
| biocViews | DataImport, MassSpectrometry, Proteomics, Software, ThirdPartyClient |
| Version | 1.14.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (10 years) |
| License | GPL-2 |
| Depends | methods |
| Imports | xml2, RCurl, utils |
| System Requirements | |
| URL | https://github.com/lgatto/rpx |
| Bug Reports | https://github.com/lgatto/rpx/issues |
See More
| Suggests | MSnbase, Biostrings, BiocStyle, testthat, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | proteoQC, RforProteomics |
| Suggests Me | MSnbase |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | rpx_1.14.0.tar.gz |
| Windows Binary | rpx_1.14.0.zip |
| Mac OS X 10.11 (El Capitan) | rpx_1.14.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/rpx |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rpx |
| Package Short Url | https://bioconductor.org/packages/rpx/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |