To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GenomicDataCommons")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.5)
Programmatically access the NIH / NCI Genomic Data Commons RESTful service.
Author: Martin Morgan [aut], Davis Sean [aut, cre]
Maintainer: Davis Sean <sdavis2 at mail.nih.gov>
Citation (from within R,
enter citation("GenomicDataCommons")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GenomicDataCommons")
| HTML | R Script | Introduction to Accessing the NCI Genomic Data Commons |
| Reference Manual |
| biocViews | DataImport, Sequencing, Software |
| Version | 1.0.5 |
| In Bioconductor since | BioC 3.5 (R-3.4) (0.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.4.0), magrittr |
| Imports | stats, httr, xml2, jsonlite, utils, lazyeval, readr, data.table, GenomicRanges, IRanges |
| LinkingTo | |
| Suggests | BiocStyle, knitr, rmarkdown, DT, testthat, listviewer, ggplot2, GenomicAlignments, Rsamtools |
| SystemRequirements | |
| Enhances | |
| URL | https://bioconductor.org/packages/GenomicDataCommons http://github.com/Bioconductor/GenomicDataCommons |
| BugReports | https://github.com/Bioconductor/GenomicDataCommons/issues/new |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Follow Installation instructions to use this package in your R session.
| Source Package | GenomicDataCommons_1.0.5.tar.gz |
| Windows Binary | GenomicDataCommons_1.0.5.zip |
| Mac OS X 10.11 (El Capitan) | GenomicDataCommons_1.0.5.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GenomicDataCommons |
| Package Short Url | http://bioconductor.org/packages/GenomicDataCommons/ |
| Package Downloads Report | Download Stats |
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