To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ISoLDE")
In most cases, you don't need to download the package archive at all.
ISoLDE
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see ISoLDE.
Integrative Statistics of alleLe Dependent Expression
Bioconductor version: 3.4
This package provides ISoLDE a new method for identifying imprinted genes. This method is dedicated to data arising from RNA sequencing technologies. The ISoLDE package implements original statistical methodology described in the publication below.
Author: Christelle Reynès [aut, cre], Marine Rohmer [aut], Guilhem Kister [aut]
Maintainer: Christelle Reynès <christelle.reynes at igf.cnrs.fr>
Citation (from within R,
enter citation("ISoLDE")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ISoLDE")
Documentation
| Reference Manual | ||
| Text | README | |
| Text | NEWS |
Details
| biocViews | Epigenetics, GeneExpression, GeneRegulation, GeneSetEnrichment, GeneticVariability, Genetics, MathematicalBiology, MultipleComparison, RNASeq, SNP, Sequencing, Software, Transcription |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (1 year) |
| License | GPL (>= 2.0) |
| Depends | R (>= 3.3.0), graphics, grDevices, stats, utils |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | www.r-project.org |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | ISoLDE_1.2.0.tar.gz |
| Windows Binary | ISoLDE_1.2.0.zip (32- & 64-bit) |
| Mac OS X 10.9 (Mavericks) | ISoLDE_1.2.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/ISoLDE/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/ISoLDE/ |
| Package Downloads Report | Download Stats |
Documentation »
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