To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DeMAND")
In most cases, you don't need to download the package archive at all.
DeMAND
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see DeMAND.
DeMAND
Bioconductor version: 3.4
DEMAND predicts Drug MoA by interrogating a cell context specific regulatory network with a small number (N >= 6) of compound-induced gene expression signatures, to elucidate specific proteins whose interactions in the network is dysregulated by the compound.
Author: Jung Hoon Woo <jw2853 at columbia.edu>, Yishai Shimoni <ys2559 at columbia.edu>
Maintainer: Jung Hoon Woo <jw2853 at columbia.edu>, Mariano Alvarez <reef103 at gmail.com>
Citation (from within R,
enter citation("DeMAND")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DeMAND")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DeMAND")
| R Script | Using DeMAND | |
| Reference Manual | ||
| Text | LICENSE |
Details
| biocViews | GeneExpression, Network, NetworkEnrichment, Software, StatisticalMethod, SystemsBiology |
| Version | 1.4.0 |
| In Bioconductor since | BioC 3.2 (R-3.2) (1.5 years) |
| License | file LICENSE |
| Depends | R (>= 2.14.0), KernSmooth, methods |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | DeMAND_1.4.0.tar.gz |
| Windows Binary | DeMAND_1.4.0.zip |
| Mac OS X 10.9 (Mavericks) | DeMAND_1.4.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/DeMAND/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/DeMAND/ |
| Package Downloads Report | Download Stats |
Documentation »
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