.check_features	internal-Voyager
.check_rg	internal-Voyager
.check_sample_id	internal-Voyager
.check_tx_file	internal-Voyager
.check_tx_file_mem	internal-Voyager
.ext_	internal-Voyager
.rm_empty_geometries	internal-Voyager
.symbol2id	internal-Voyager
.value2df	internal-Voyager
.warn_symbol_duplicate	internal-Voyager
addImg,SpatialFeatureExperiment-method	SFE-image
addSelectTx	readSelectTx
addTxSpots	formatTxSpots
addTxTech	formatTxTech
addVisiumSpotPoly	addVisiumSpotPoly
affine	SFE-transform
affineImg	affineImg
affineImg,BioFormatsImage-method	affineImg
affineImg,ExtImage-method	affineImg
affineImg,SpatialFeatureExperiment-method	SFE-image
affineImg,SpatRasterImage-method	affineImg
aggBboxes	aggBboxes
aggregate,SpatialFeatureExperiment-method	aggregate-SpatialFeatureExperiment-method
aggregateTx	aggregateTx
aggregateTxTech	aggregateTx
annotGeometries	annotGeometries
annotGeometries,SpatialFeatureExperiment-method	annotGeometries
annotGeometries<-	annotGeometries
annotGeometries<-,SpatialFeatureExperiment-method	annotGeometries
annotGeometry	annotGeometries
annotGeometry,SpatialFeatureExperiment-method	annotGeometries
annotGeometry<-	annotGeometries
annotGeometry<-,SpatialFeatureExperiment-method	annotGeometries
annotGeometryNames	annotGeometries
annotGeometryNames,SpatialFeatureExperiment-method	annotGeometries
annotGeometryNames<-	annotGeometries
annotGeometryNames<-,SpatialFeatureExperiment,character-method	annotGeometries
annotGraph	spatialGraphs
annotGraph<-	spatialGraphs
annotGraphNames	spatialGraphs
annotGraphNames<-	spatialGraphs
annotGraphs	spatialGraphs
annotGraphs<-	spatialGraphs
annotNPred	annotPred
annotOp	annotOp
annotPred	annotPred
annotSummary	annotSummary
bbox	bbox-SpatialFeatureExperiment-method
bbox,SpatialFeatureExperiment-method	bbox-SpatialFeatureExperiment-method
bbox_center	bbox_center
BioFormatsImage	BioFormatsImage
BioFormatsImage-class	BioFormatsImage
BioFormatsImage-getters	BioFormatsImage-getters
cbind,SpatialFeatureExperiment-method	cbind-SpatialFeatureExperiment-method
cellSeg	colGeometries
cellSeg<-	colGeometries
centroids	colGeometries
centroids<-	colGeometries
changeSampleIDs	changeSampleIDs
colData	reexports
colData<-	reexports
colFeatureData	colFeatureData
colGeometries	colGeometries
colGeometries<-	colGeometries
colGeometry	colGeometries
colGeometry<-	colGeometries
colGeometryNames	colGeometries
colGeometryNames<-	colGeometries
colGraph	spatialGraphs
colGraph<-	spatialGraphs
colGraphNames	spatialGraphs
colGraphNames<-	spatialGraphs
colGraphs	spatialGraphs
colGraphs<-	spatialGraphs
containsOutOfMemoryData,SpatialFeatureExperiment-method	containsOutOfMemoryData-SpatialFeatureExperiment-method
counts	reexports
crop	crop
cropImg	cropImg
cropImg,BioFormatsImage-method	cropImg
cropImg,ExtImage-method	cropImg
cropImg,SpatRasterImage-method	cropImg
df2sf	df2sf
dim,BioFormatsImage-method	dim-BioFormatsImage-method
dim,ExtImage-method	dim-ExtImage-method
dimGeometries	dimGeometries
dimGeometries,SpatialFeatureExperiment-method	dimGeometries
dimGeometries<-	dimGeometries
dimGeometries<-,SpatialFeatureExperiment-method	dimGeometries
dimGeometry	dimGeometries
dimGeometry,SpatialFeatureExperiment-method	dimGeometries
dimGeometry<-	dimGeometries
dimGeometry<-,SpatialFeatureExperiment-method	dimGeometries
dimGeometryNames	dimGeometries
dimGeometryNames,SpatialFeatureExperiment-method	dimGeometries
dimGeometryNames<-	dimGeometries
dimGeometryNames<-,SpatialFeatureExperiment,numeric,character-method	dimGeometries
ext	ext
ext,BioFormatsImage-method	ext
ext,ExtImage-method	ext
ext,SpatRasterImage-method	ext
ext<-,BioFormatsImage,numeric-method	ext
ext<-,ExtImage,numeric-method	ext
ext<-,SpatRasterImage,numeric-method	ext
ExtImage	ExtImage
ExtImage-class	ExtImage
findDebrisCells	findDebrisCells
findDebrisCells,matrix-method	findDebrisCells
findDebrisCells,sf-method	findDebrisCells
findDebrisCells,sfc-method	findDebrisCells
findDebrisCells,SpatialExperiment-method	findDebrisCells
findSpatialNeighbors	findSpatialNeighbors
findSpatialNeighbors,SpatialFeatureExperiment-method	findSpatialNeighbors
findVisiumGraph	findVisiumGraph
findVisiumHDGraph	findVisiumHDGraph
formatTxSpots	formatTxSpots
formatTxTech	formatTxTech
gdalParquetAvailable	gdalParquetAvailable
geometryFeatureData	colFeatureData
getImg	reexports
getParams	getParams
getPixelSize	getPixelSize
getTechTxFields	getTechTxFields
getTissueBoundaryConcave	getTissueBoundaryConcave
getTissueBoundaryImg	getTissueBoundaryImg
imageIDs	imageIDs
Img<-	Img-set-SpatialExperiment-method
Img<-,SpatialExperiment-method	Img-set-SpatialExperiment-method
imgData	reexports
imgRaster	imgRaster
imgRaster,BioFormatsImage-method	imgRaster
imgRaster,ExtImage-method	imgRaster
imgRaster,SpatRasterImage-method	imgRaster
imgSource	imgSource
imgSource,BioFormatsImage-method	imgSource
imgSource,ExtImage-method	imgSource
imgSource,SpatRasterImage-method	imgSource
internal-Voyager	internal-Voyager
isFull	BioFormatsImage-getters
isFull,BioFormatsImage-method	BioFormatsImage-getters
localResult	localResults
localResult,SpatialFeatureExperiment-method	localResults
localResult<-	localResults
localResult<-,SpatialFeatureExperiment-method	localResults
localResultAttrs	localResults
localResultAttrs,SpatialFeatureExperiment-method	localResults
localResultFeatures	localResults
localResultFeatures,SpatialFeatureExperiment-method	localResults
localResultNames	localResults
localResultNames,SpatialFeatureExperiment-method	localResults
localResultNames<-	localResults
localResultNames<-,SpatialFeatureExperiment,character-method	localResults
localResults	localResults
localResults,SpatialFeatureExperiment-method	localResults
localResults<-	localResults
localResults<-,SpatialFeatureExperiment-method	localResults
logcounts	reexports
mirror	SFE-transform
mirrorImg	mirrorImg
mirrorImg,BioFormatsImage-method	mirrorImg
mirrorImg,ExtImage-method	mirrorImg
mirrorImg,SpatialFeatureExperiment-method	SFE-image
mirrorImg,SpatRasterImage-method	mirrorImg
multi_listw2sparse	multi_listw2sparse
nucSeg	colGeometries
nucSeg<-	colGeometries
origin	BioFormatsImage-getters
origin,BioFormatsImage-method	BioFormatsImage-getters
read10xVisiumSFE	read10xVisiumSFE
readCosMX	readCosMX
readSelectTx	readSelectTx
readVisiumHD	readVisiumHD
readVizgen	readVizgen
readXenium	readXenium
reducedDim	reexports
reducedDimFeatureData	colFeatureData
reexports	reexports
removeEmptySpace	removeEmptySpace
rmvImg	reexports
ROIPoly	colGeometries
ROIPoly<-	colGeometries
rotate	SFE-transform
rotateImg	rotateImg
rotateImg,BioFormatsImage-method	rotateImg
rotateImg,ExtImage-method	rotateImg
rotateImg,SpatialFeatureExperiment-method	SFE-image
rotateImg,SpatRasterImage-method	rotateImg
rowData	reexports
rowFeatureData	colFeatureData
rowGeometries	rowGeometries
rowGeometries<-	rowGeometries
rowGeometry	rowGeometries
rowGeometry<-	rowGeometries
rowGeometryNames	rowGeometries
rowGeometryNames<-	rowGeometries
rowGraph	spatialGraphs
rowGraph<-	spatialGraphs
rowGraphNames	spatialGraphs
rowGraphNames<-	spatialGraphs
rowGraphs	spatialGraphs
rowGraphs<-	spatialGraphs
sampleIDs	sampleIDs
saveRDS,SpatialFeatureExperiment-method	saveRDS-SpatialFeatureExperiment-method
scale	SFE-transform
scaleImg	scaleImg
scaleImg,AlignedSpatialImage-method	scaleImg
scaleImg,BioFormatsImage-method	scaleImg
scaleImg,SpatialFeatureExperiment-method	SFE-image
SFE-image	SFE-image
SFE-transform	SFE-transform
SFEVersion	updateObject
show,BioFormatsImage-method	BioFormatsImage
show,ExtImage-method	ExtImage
show,SpatialFeatureExperiment-method	show-SpatialFeatureExperiment-method
show,SpatRasterImage-method	SpatRasterImage
spatialCoords	reexports
spatialCoords<-	reexports
spatialCoordsNames	reexports
SpatialFeatureExperiment	SpatialFeatureExperiment
SpatialFeatureExperiment-class	SpatialFeatureExperiment-class
SpatialFeatureExperiment-coercion	SpatialFeatureExperiment-coercion
SpatialFeatureExperiment-subset	SpatialFeatureExperiment-subset
spatialGraph	spatialGraphs
spatialGraph,SpatialFeatureExperiment-method	spatialGraphs
spatialGraph<-	spatialGraphs
spatialGraph<-,SpatialFeatureExperiment-method	spatialGraphs
spatialGraphNames	spatialGraphs
spatialGraphNames,SpatialFeatureExperiment,numeric-method	spatialGraphs
spatialGraphNames<-	spatialGraphs
spatialGraphNames<-,SpatialFeatureExperiment,numeric,ANY,character-method	spatialGraphs
spatialGraphs	spatialGraphs
spatialGraphs,SpatialFeatureExperiment-method	spatialGraphs
spatialGraphs<-	spatialGraphs
spatialGraphs<-,SpatialFeatureExperiment-method	spatialGraphs
SpatRasterImage	SpatRasterImage
SpatRasterImage-class	SpatRasterImage
splitByCol	splitByCol
splitByCol,SpatialFeatureExperiment,list-method	splitByCol
splitByCol,SpatialFeatureExperiment,sf-method	splitByCol
splitByCol,SpatialFeatureExperiment,sfc-method	splitByCol
splitComponent	splitByCol
splitContiguity	splitByCol
splitSamples	splitByCol
spotPoly	colGeometries
spotPoly<-	colGeometries
st_any_intersects	st_any_pred
st_any_pred	st_any_pred
st_n_intersects	st_any_pred
st_n_pred	st_any_pred
tissueBoundary	annotGeometries
tissueBoundary<-	annotGeometries
toExtImage	toExtImage
toExtImage,BioFormatsImage-method	toExtImage
toExtImage,SpatRasterImage-method	toExtImage
toSpatialFeatureExperiment	SpatialFeatureExperiment-coercion
toSpatialFeatureExperiment,Seurat-method	SpatialFeatureExperiment-coercion
toSpatialFeatureExperiment,SingleCellExperiment-method	SpatialFeatureExperiment-coercion
toSpatialFeatureExperiment,SpatialExperiment-method	SpatialFeatureExperiment-coercion
toSpatRasterImage	toSpatRasterImage
toSpatRasterImage,BioFormatsImage-method	toSpatRasterImage
toSpatRasterImage,ExtImage-method	toSpatRasterImage
transformation	BioFormatsImage-getters
transformation,BioFormatsImage-method	BioFormatsImage-getters
translate	SFE-transform
translateImg	translateImg
translateImg,BioFormatsImage-method	translateImg
translateImg,ExtImage-method	translateImg
translateImg,SpatialFeatureExperiment-method	SFE-image
translateImg,SpatRasterImage-method	translateImg
transpose	SFE-transform
transposeImg	transposeImg
transposeImg,BioFormatsImage-method	transposeImg
transposeImg,ExtImage-method	transposeImg
transposeImg,SpatialFeatureExperiment-method	SFE-image
transposeImg,SpatRasterImage-method	transposeImg
txSpots	rowGeometries
txSpots<-	rowGeometries
unit	unit-SpatialFeatureExperiment-method
unit,SpatialFeatureExperiment-method	unit-SpatialFeatureExperiment-method
updateObject	updateObject
updateObject,SpatialFeatureExperiment-method	updateObject
visium_row_col	visium_row_col
[,SpatialFeatureExperiment,ANY,ANY,ANY-method	SpatialFeatureExperiment-subset
