rhdf5filters
This is the development version of rhdf5filters; for the stable release version, see rhdf5filters.
HDF5 Compression Filters
Bioconductor version: Development (3.22)
Provides a collection of additional compression filters for HDF5 datasets. The package is intended to provide seemless integration with rhdf5, however the compiled filters can also be used with external applications.
Author: Mike Smith [aut, ccp]
, Hugo Gruson [cre]
Maintainer: Hugo Gruson <hugo.gruson at embl.de>
citation("rhdf5filters")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("rhdf5filters")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rhdf5filters")| HDF5 Compression Filters | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | DataImport, Infrastructure, Software |
| Version | 1.21.4 |
| In Bioconductor since | BioC 3.11 (R-4.0) (5.5 years) |
| License | BSD_2_clause + file LICENSE |
| Depends | |
| Imports | |
| System Requirements | GNU make |
| URL | https://github.com/Huber-group-EMBL/rhdf5filters |
| Bug Reports | https://github.com/Huber-group-EMBL/rhdf5filters/issues |
See More
| Suggests | BiocStyle, knitr, rmarkdown, tinytest, rhdf5(>= 2.47.7) |
| Linking To | Rhdf5lib |
| Enhances | |
| Depends On Me | |
| Imports Me | h5mread, rhdf5 |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | rhdf5filters_1.21.4.tar.gz |
| Windows Binary (x86_64) | rhdf5filters_1.21.0.zip |
| macOS Binary (x86_64) | rhdf5filters_1.21.4.tgz |
| macOS Binary (arm64) | rhdf5filters_1.21.4.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/rhdf5filters |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rhdf5filters |
| Bioc Package Browser | https://code.bioconductor.org/browse/rhdf5filters/ |
| Package Short Url | https://bioconductor.org/packages/rhdf5filters/ |
| Package Downloads Report | Download Stats |