2c5cb9f3ad577d861ab285fbcd513846 *DESCRIPTION
8042dcb7f1b8242dad58c3ab6dc9e22e *INDEX
bf967ee84084607170e36934a421ca64 *LICENSE
bb0b5f0a8d31da8f19c79d7a8800a3e2 *Meta/Rd.rds
97f39cfa069205fc947ab1e51ea53d4e *Meta/features.rds
2e3b7dc8600e91541c9b38ec4e063e92 *Meta/hsearch.rds
84217e30a25d039e29748fa5adbf147f *Meta/links.rds
76fe6cb040338824cb5da2a9891b7991 *Meta/nsInfo.rds
3363e51adafd0a17c11ae03162e7689c *Meta/package.rds
0aba391fac3a4eaf19eae370ce21ca0e *Meta/vignette.rds
ccd534f843ad0c498fa8f5492f92b0ff *NAMESPACE
28aed2a32481f626701f7fc052b9a2ea *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/Rsamtools
0cf1d6b596847c6baac0c2d51d690bb3 *R/Rsamtools.rdb
cf460d431a138dbfc0e76ec7b6f925dd *R/Rsamtools.rdx
ee263a30d1028a8f0e7f38566c47114c *doc/Rsamtools-Overview.R
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22323232ba2f824ac8db07672145f03d *extdata/ce2dict1.fa
25a019557bb5685d766ed61dc4603a74 *extdata/ce2dict1.fa.fai
7df758adaaf5b6d487ac22e4dba6c31e *extdata/ex1.bam
1888862b9d22ddb8ca663eabc41c78f0 *extdata/ex1.bam.bai
df4a69daba471f2e896bde5f5553ed2a *extdata/ex1.bcf.gz
cab92ee448c41b442150d81fd32a28d9 *extdata/ex1.bcf.gz.csi
96db184679450f1ff65e95a5a6712d27 *extdata/ex1.sam
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5d8c67b81c8cc21846c6afae879ca705 *extdata/example.gtf.gz.tbi
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9d18ffdc11a18e91d5c64b718602c1ac *extdata/example_from_SAM_Spec.sam
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bf9be39e5272f1455de70a08cea211ac *extdata/olaps.Rda
715c47c0662b143147324b27bb854dc9 *extdata/pileup.txt
5494fd19934144f67d2a85b4ab89bcd4 *extdata/querybins.bam
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6f871a9c2a93270190defcd22f31cd64 *extdata/querybins.sam
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da8444454b8554ca98d7c6e31d0a6f1b *extdata/revbins.bam.bai
c76ac123d3bd572758ff49d8f1ef0303 *extdata/revbins.sam
46d5ed9ac766376dee08e14d107dabfd *extdata/samtools-github.txt
23294b7cc9de134693fe56665ad54ca9 *extdata/slxMaq09_urls.txt
5ab7017a87bd6ba99c768a9155f1d8f6 *extdata/tagfilter.bam
5e643f92d1e20fffae85d626be5b0d95 *extdata/tagfilter.bam.bai
e923e5eab408e6617e72226c7875b974 *extdata/tagfilter.sam
120ab4b3e5c957a44ce695f09af76618 *extdata/tiny.bam
b99c7ee3f818e3ad21ab80198ab09e55 *extdata/tiny.bam.bai
7aee88510e5c4378a271285877a21c66 *extdata/tiny.sam
ce71aff63ec52a72d26cadef6341e0ac *extdata/tophat/README
a3aac6bef3effd53505adb9b2e013d6a *extdata/tophat/accepted_hits.sam
27b6e5502996fbf2dbbc069ee9bf84f7 *extdata/tophat/coverage.wig
4ece538c2a4c0dc91de5e9967b97fd8a *extdata/tophat/junctions.bed
939fa778d90b30419b267b056377242a *help/AnIndex
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3e0a559eee1c9e70d0a66be59c837f2d *help/Rsamtools.rdx
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45a69fcdcb24157066f7fa9c409913b9 *help/paths.rds
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8b9362669af13540a86a3ac6cf22f99d *html/R.css
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7b400651565e7a8ecb8f6635023f13a6 *unitTests/cases/RNEXT.bam
7b8ce960ff8555ae68a9c51007e1542c *unitTests/cases/ex1.sam.gz
7df758adaaf5b6d487ac22e4dba6c31e *unitTests/cases/ex1_noindex.bam
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c845a4269940541c04f8349fbe23f92c *unitTests/test_scanBamFlag.R
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