c3bde156c0761d9578badd79a0161031 *CITATION
9c31fdae6c773987d4948accbd842292 *DESCRIPTION
79c58e2ad89d35e1a68916a9d5ba0b79 *INDEX
96e936da77b1f820cc30476f461577b0 *Meta/Rd.rds
5d332e28168b6d1151f565be6972f9d5 *Meta/data.rds
41622305d1b139d0fa70aaba76dca134 *Meta/features.rds
8ded75f29c1fce59e33400115510a9ca *Meta/hsearch.rds
74ba348e378bdde35abdc0a9d603e710 *Meta/links.rds
92843a02426d6357653d8d984660fac4 *Meta/nsInfo.rds
60b7bff7a0709876730c43eb032c1ff2 *Meta/package.rds
1f20c7d7f1537295824b743bf0e98023 *Meta/vignette.rds
c3b77cb7b773121dd3778f785becb898 *NAMESPACE
a0fddb94813c5ed2c6f607d24b436efd *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/SGSeq
091d4eb63e003004deda979236001f2f *R/SGSeq.rdb
c84b9f6151e3fa2e8c4cd11ef6d42eed *R/SGSeq.rdx
2126d68c41dd92136cf59c43ccaeca65 *data/Rdata.rdb
257139c5fa30d52425dd68cb83b67d50 *data/Rdata.rds
acce3494e91d6ce7bcd46a9883d2e158 *data/Rdata.rdx
202e9bcba9f5a67e4c0a054c60ba0736 *doc/SGSeq.R
985f1ab3c7e7e79dc622627c31fbbca3 *doc/SGSeq.Rmd
2e5a7c6255ea668417ecce7db2d335c0 *doc/SGSeq.html
9f286d5adabf25aab479a366c45a0d28 *doc/index.html
f635a290f6dd7bd6a571a748b9b4ce2d *extdata/bams/N1.bam
10e437ecd83a1648f6feb28efd666a3d *extdata/bams/N1.bam.bai
6ae387d023817532da8ab3273731c6b7 *extdata/bams/N2.bam
7bc7623be9eb5b52f7d272b1e54d7c1f *extdata/bams/N2.bam.bai
e07e5bf79859b2028cb402c079577316 *extdata/bams/N3.bam
20cd985ef7ffa218da184f187ce50dea *extdata/bams/N3.bam.bai
b0a8a2796e4cd67d1c5231481dc298f7 *extdata/bams/N4.bam
c14641aca82d7b303f9ab448ce5b4f2e *extdata/bams/N4.bam.bai
dab9dc6d74c1e618b960baa0148740af *extdata/bams/T1.bam
f1bd4bdf90f83ca520ab1fba63cea726 *extdata/bams/T1.bam.bai
6e43c101708a4040937e389b9888832b *extdata/bams/T2.bam
b48cfbe384de76d521dff37845bb811b *extdata/bams/T2.bam.bai
1751240dde82ab77847b18cc93ce4b31 *extdata/bams/T3.bam
b0c6a086071d7f7d5c5153cfc1778147 *extdata/bams/T3.bam.bai
0ed841f711101c6ed48133d5cf35c9df *extdata/bams/T4.bam
33e452914d0a92a7287b5902f7a223d3 *extdata/bams/T4.bam.bai
7d31b555fc3a0ef493db24637a69d7b5 *help/AnIndex
cd45068c0e4901c0bb8e4813318445dc *help/SGSeq.rdb
5609acfa54978cf565eb276e85409e3a *help/SGSeq.rdx
ba6ed5f629e54405c87ceb24b82cfc5f *help/aliases.rds
ec35224d73b09a1772866c62a286dfe7 *help/paths.rds
b73fcbfe06820d20b88306a46ad5843d *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
916134d923047d0d83dd3cac336afac2 *scripts/createExampleData.R
62e6eb32b9d91e2d2e22f8a0ebe3999b *unitTests/test_analyzeFeatures.R
41062843ebebbec77ddf6fbc1eebe14b *unitTests/test_analyzeVariants.R
1a72ecb53227d3f1a1b3ea90297e911f *unitTests/test_annotate.R
445456f7b917f405ff4ffa9c6f0c305a *unitTests/test_classes.R
fca7f739cb7036e0480477929e575cad *unitTests/test_convertToSGFeatures.R
008fcf1ee84836bd7c707d4e91053124 *unitTests/test_convertToTxFeatures.R
a3b06c1e5dab349b9a3fbacb6ade7563 *unitTests/test_findSGVariants.R
018d012a9bc57431328f9574ad429925 *unitTests/test_getBamInfo.R
49e19e07becae41efb382ed9f01719b2 *unitTests/test_getSGFeatureCounts.R
66d59bb78d566b15751680e3d3fa1c1d *unitTests/test_getSGVariantCounts.R
82ac16fa44fac098647f31ac89dfa696 *unitTests/test_mergeTxFeatures.R
9212fb3c627df1a8f0db8e52fa7b5da2 *unitTests/test_predictTxFeatures.R
75201f127c6a3884632ed88c88714ee0 *unitTests/test_predictVariantEffects.R
