To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("seqTools")

In most cases, you don't need to download the package archive at all.

seqTools

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see seqTools.

Analysis of nucleotide, sequence and quality content on fastq files.

Bioconductor version: 3.2

Analyze read length, phred scores and alphabet frequency and DNA k-mers on uncompressed and compressed fastq files.

Author: Wolfgang Kaisers

Maintainer: Wolfgang Kaisers <kaisers at med.uni-duesseldorf.de>

Citation (from within R, enter citation("seqTools")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("seqTools")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("seqTools")

biocViews	QualityControl, Sequencing, Software
Version	1.4.1
In Bioconductor since	BioC 3.0 (R-3.1) (1.5 years)
License	Artistic-2.0
Depends	methods, utils, zlibbioc
Imports
LinkingTo	zlibbioc
Suggests	RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	seqTools_1.4.1.tar.gz
Windows Binary	seqTools_1.4.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	seqTools_1.4.0.tgz
Mac OS X 10.9 (Mavericks)	seqTools_1.4.1.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/seqTools/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/seqTools/
Package Downloads Report	Download Stats

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