To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("myvariant")

In most cases, you don't need to download the package archive at all.

myvariant

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see myvariant.

Accesses MyVariant.info variant query and annotation services

Bioconductor version: 3.2

MyVariant.info is a comprehensive aggregation of variant annotation resources. myvariant is a wrapper for querying MyVariant.info services

Author: Adam Mark

Maintainer: Adam Mark, Chunlei Wu <cwu at scripps.edu>

Citation (from within R, enter citation("myvariant")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("myvariant")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("myvariant")

PDF		Using MyVariant.R
PDF		Reference Manual

biocViews	Annotation, GenomicVariation, Software, VariantAnnotation
Version	1.0.1
In Bioconductor since	BioC 3.2 (R-3.2) (0.5 years)
License	Artistic-2.0
Depends	R (>= 3.2.1), VariantAnnotation
Imports	httr, jsonlite, S4Vectors, Hmisc, plyr, magrittr, GenomeInfoDb
LinkingTo
Suggests	BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	myvariant_1.0.1.tar.gz
Windows Binary	myvariant_1.0.1.zip
Mac OS X 10.6 (Snow Leopard)	myvariant_1.0.1.tgz
Mac OS X 10.9 (Mavericks)	myvariant_1.0.1.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/myvariant/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/myvariant/
Package Downloads Report	Download Stats

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