To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SISPA")

In most cases, you don't need to download the package archive at all.

SISPA

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see SISPA.

SISPA: Method for Sample Integrated Set Profile Analysis

Bioconductor version: 3.2

Sample Integrated Gene Set Analysis (SISPA) is a method designed to define sample groups with similar gene set enrichment profiles.

Author: Bhakti Dwivedi Ph.D. & Jeanne Kowalski Ph.D.

Maintainer: Bhakti Dwivedi <bhakti.dwivedi at emory.edu>

Citation (from within R, enter citation("SISPA")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SISPA")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SISPA")

HTML		replace me with the vignette title
PDF		Reference Manual
Text		NEWS

biocViews	GeneSetEnrichment, GenomeWideAssociation, Software
Version	1.0.0
In Bioconductor since	BioC 3.2 (R-3.2) (0.5 years)
License	GPL-2
Depends	R (>= 3.2), GSVA, changepoint, data.table, ggplot2, plyr
Imports
LinkingTo
Suggests	knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	SISPA_1.0.0.tar.gz
Windows Binary	SISPA_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	SISPA_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	SISPA_1.0.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/SISPA/tree/release-3.2
Package Short Url	http://bioconductor.org/packages/SISPA/
Package Downloads Report	Download Stats

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