To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("PGSEA")
In most cases, you don't need to download the package archive at all.
This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see PGSEA.
Bioconductor version: 3.2
Parametric Analysis of Gene Set Enrichment
Author: Kyle Furge <kyle.furge at vai.org> and Karl Dykema <karl.dykema at vai.org>
Maintainer: Karl Dykema <karl.dykema at vai.org>
Citation (from within R,
enter citation("PGSEA")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("PGSEA")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("PGSEA")
HOWTO: PGSEA | ||
HOWTO: PGSEA Example Workflow | ||
Reference Manual |
biocViews | Microarray, Software |
Version | 1.44.0 |
In Bioconductor since | BioC 2.0 (R-2.5) (9 years) |
License | GPL-2 |
Depends | R (>= 2.10), GO.db, KEGG.db, AnnotationDbi, annaffy, methods, Biobase(>= 2.5.5) |
Imports | |
LinkingTo | |
Suggests | GSEABase, GEOquery, org.Hs.eg.db, hgu95av2.db, limma |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | GeneExpressionSignature |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | PGSEA_1.44.0.tar.gz |
Windows Binary | PGSEA_1.44.0.zip |
Mac OS X 10.6 (Snow Leopard) | PGSEA_1.44.0.tgz |
Mac OS X 10.9 (Mavericks) | PGSEA_1.44.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/PGSEA/tree/release-3.2 |
Package Short Url | http://bioconductor.org/packages/PGSEA/ |
Package Downloads Report | Download Stats |
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