TxDb.Mmusculus.UCSC.mm9.knownGene
This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see TxDb.Mmusculus.UCSC.mm9.knownGene.
Annotation package for TxDb object(s)
Bioconductor version: 3.17
Exposes an annotation databases generated from UCSC by exposing these as TxDb objects
Author: Marc Carlson, Bioconductor Package Maintainer <maintainer at bioconductor.org> [cre]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R, enter
citation("TxDb.Mmusculus.UCSC.mm9.knownGene")
):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TxDb.Mmusculus.UCSC.mm9.knownGene")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | AnnotationData, Genetics, Mus_musculus, TxDb |
Version | 3.2.2 |
License | Artistic-2.0 |
Depends | GenomicFeatures(>= 1.21.30) |
Imports | AnnotationDbi |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | ChIPQC, Cogito, INSPEcT, profileplyr, Rmmquant |
Suggests Me | annotatr, BSgenome.Mmusculus.UCSC.mm9, CAGEfightR, CAGEWorkflow, chipenrich.data, chipseq, compEpiTools, EpiCompare, ggbio, GRaNIE, spatzie |
Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | TxDb.Mmusculus.UCSC.mm9.knownGene_3.2.2.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Package Short Url | https://bioconductor.org/packages/TxDb.Mmusculus.UCSC.mm9.knownGene/ |
Package Downloads Report | Download Stats |