benchmarkfdrData2019
This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see benchmarkfdrData2019.
Data and Benchmarking Results from Korthauer and Kimes et al. (2019)
Bioconductor version: 3.16
Benchmarking results for experimental and simulated data sets used in Korthauer and Kimes et al. (2019) to compare methods for controlling the false discovery rate.
Author: Stephanie Hicks [aut, cre] 
, Keegan Korthauer [aut] , Patrick Kimes [aut]
Maintainer: Stephanie Hicks <shicks19 at jhu.edu>
citation("benchmarkfdrData2019")):
Installation
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("benchmarkfdrData2019")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("benchmarkfdrData2019")| Exploring and updating FDR benchmarking results | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | ExperimentData, ExperimentHub, ExpressionData, RNASeqData, SingleCellData |
| Version | 1.12.0 |
| License | MIT + file LICENSE |
| Depends | R (>= 3.6.0), SummarizedExperiment, ExperimentHub |
| Imports | utils |
| System Requirements | |
| URL | |
| Bug Reports | https://github.com/stephaniehicks/benchmarkfdrData2019/issues |
See More
| Suggests | rmarkdown, knitr, BiocStyle, testthat, SummarizedBenchmark, dplyr, ggplot2, rlang |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | benchmarkfdrData2019_1.12.0.tar.gz |
| Windows Binary | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/benchmarkfdrData2019 |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/benchmarkfdrData2019 |
| Package Short Url | https://bioconductor.org/packages/benchmarkfdrData2019/ |
| Package Downloads Report | Download Stats |