COHCAPanno
This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see COHCAPanno.
Annotations for City of Hope CpG Island Analysis Pipeline
Bioconductor version: 3.13
Provides genomic location, nearby CpG island and nearby gene information for common Illumina methylation array platforms
Author: Charles Warden
Maintainer: Charles Warden <cwarden45 at gmail.com>
Citation (from within R, enter
citation("COHCAPanno")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("COHCAPanno")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("COHCAPanno")| COHCAPanno Vignette | R Script | |
| Reference Manual |
Details
| biocViews | ArrayExpress, CpGIslandData, ExperimentData, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData |
| Version | 1.28.0 |
| License | GPL-3 |
| Depends | R (>= 2.10) |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | COHCAP |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | COHCAPanno_1.28.0.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/COHCAPanno |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/COHCAPanno |
| Package Short Url | https://bioconductor.org/packages/COHCAPanno/ |
| Package Downloads Report | Download Stats |