MafH5.gnomAD.r3.0.GRCh38
This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see MafH5.gnomAD.r3.0.GRCh38.
Minor allele frequency data from gnomAD release 3.0 for GRCh38 stored using a HDF5 backend
Bioconductor version: 3.13
Store minor allele frequency data from the Genome Aggregation Database (gnomAD release 3.0) for the human genome version GRCh38 using a HDF5 backend.
Author: Robert Castelo
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R, enter
citation("MafH5.gnomAD.r3.0.GRCh38")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MafH5.gnomAD.r3.0.GRCh38")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| NEWS | Text |
Details
| biocViews | AnnotationData, Genetics, GenomicScores, Homo_sapiens |
| Version | 3.13.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.5.0), GenomicScores(>= 1.11.7) |
| Imports | utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome, rhdf5, HDF5Array |
| System Requirements | |
| URL |
See More
| Suggests | SNPlocs.Hsapiens.dbSNP149.GRCh38 |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MafH5.gnomAD.r3.0.GRCh38_3.13.0.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Package Short Url | https://bioconductor.org/packages/MafH5.gnomAD.r3.0.GRCh38/ |
| Package Downloads Report | Download Stats |