methylMnM
This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see methylMnM.
detect different methylation level (DMR)
Bioconductor version: 3.13
To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.
Author: Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang
Maintainer: Yan Zhou<zhouy1016 at 163.com>
Citation (from within R, enter
citation("methylMnM")
):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("methylMnM")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("methylMnM")
methylMnM | R Script | |
Reference Manual |
Details
biocViews | DNAMethylation, Sequencing, Software |
Version | 1.30.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
License | GPL-3 |
Depends | R (>= 2.12.1), edgeR, statmod |
Imports | |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | SIMD |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | methylMnM_1.30.0.tar.gz |
Windows Binary | methylMnM_1.30.0.zip |
macOS 10.13 (High Sierra) | methylMnM_1.30.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/methylMnM |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/methylMnM |
Bioc Package Browser | https://code.bioconductor.org/browse/methylMnM/ |
Package Short Url | https://bioconductor.org/packages/methylMnM/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.13 | Source Archive |