RchyOptimyx
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see RchyOptimyx.
Optimyzed Cellular Hierarchies for Flow Cytometry
Bioconductor version: 3.13
Constructs a hierarchy of cells using flow cytometry for maximization of an external variable (e.g., a clinical outcome or a cytokine response).
Author: Adrin Jalali, Nima Aghaeepour
Maintainer: Adrin Jalali <adrin.jalali at gmail.com>, Nima Aghaeepour <naghaeep at gmail.com>
citation("RchyOptimyx")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RchyOptimyx")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | FlowCytometry, Software |
| Version | 2.32.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) (12 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10) |
| Imports | Rgraphviz, sfsmisc, graphics, methods, graph, grDevices, flowType (>= 2.0.0) |
| System Requirements | |
| URL |
See More
| Suggests | flowCore |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/RchyOptimyx |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RchyOptimyx |
| Package Short Url | https://bioconductor.org/packages/RchyOptimyx/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.13 | Source Archive |