cytolib
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see cytolib.
C++ infrastructure for representing and interacting with the gated cytometry data
Bioconductor version: 3.12
This package provides the core data structure and API to represent and interact with the gated cytometry data.
Author: Mike Jiang
Maintainer: Mike Jiang <wjiang2 at fhcrc.org>, Jake Wagner <jpwagner at fhcrc.org>
Citation (from within R, enter
citation("cytolib")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("cytolib")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cytolib")| Using cytolib | HTML | R Script |
| Reference Manual | ||
| LICENSE | Text |
Details
| biocViews | DataImport, DataRepresentation, FlowCytometry, ImmunoOncology, Preprocessing, Software |
| Version | 2.2.1 |
| In Bioconductor since | BioC 3.6 (R-3.4) (6.5 years) |
| License | file LICENSE |
| Depends | R (>= 3.4) |
| Imports | RcppParallel, RProtoBufLib |
| System Requirements | GNU make, C++11 |
| URL |
See More
| Suggests | knitr |
| Linking To | Rcpp, BH (>= 1.72.0-2), RProtoBufLib(>= 1.99.8), Rhdf5lib, RcppArmadillo, RcppParallel (>= 4.4.2-1) |
| Enhances | |
| Depends On Me | |
| Imports Me | CytoML, flowCore, flowWorkspace |
| Suggests Me | |
| Links To Me | CytoML, flowCore, flowWorkspace |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | cytolib_2.2.1.tar.gz |
| Windows Binary | cytolib_2.2.1.zip (32- & 64-bit) |
| macOS 10.13 (High Sierra) | cytolib_2.2.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/cytolib |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/cytolib |
| Bioc Package Browser | https://code.bioconductor.org/browse/cytolib/ |
| Package Short Url | https://bioconductor.org/packages/cytolib/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |