RUVnormalize
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see RUVnormalize.
RUV for normalization of expression array data
Bioconductor version: 3.12
RUVnormalize is meant to remove unwanted variation from gene expression data when the factor of interest is not defined, e.g., to clean up a dataset for general use or to do any kind of unsupervised analysis.
Author: Laurent Jacob
Maintainer: Laurent Jacob <laurent.jacob at univ-lyon1.fr>
citation("RUVnormalize")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RUVnormalize")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RUVnormalize")| RUVnormalize | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Normalization, Software, StatisticalMethod |
| Version | 1.24.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (9.5 years) |
| License | GPL-3 |
| Depends | R (>= 2.10.0) |
| Imports | RUVnormalizeData, Biobase |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | spams |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | RUVnormalize_1.24.0.tar.gz |
| Windows Binary | RUVnormalize_1.24.0.zip |
| macOS 10.13 (High Sierra) | RUVnormalize_1.24.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/RUVnormalize |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RUVnormalize |
| Bioc Package Browser | https://code.bioconductor.org/browse/RUVnormalize/ |
| Package Short Url | https://bioconductor.org/packages/RUVnormalize/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |