allenpvc
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see allenpvc.
GEO accession data GSE71585 as a SingleCellExperiment
Bioconductor version: 3.10
Celular taxonomy of the primary visual cortex in adult mice based on single cell RNA-sequencing from a study performed by the Allen Institute for Brain Science. In said study 49 transcriptomic cell types are identified.
Author: Diogo P. P. Branco
Maintainer: Diogo P. P. Branco <diogo.pp.branco at gmail.com>
citation("allenpvc")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("allenpvc")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("allenpvc")| Vignette Title | HTML | R Script |
| Reference Manual |
Details
| biocViews | ExperimentData, ExpressionData, RNASeqData, SingleCellData |
| Version | 1.4.0 |
| License | CC0 |
| Depends | R (>= 3.5.0), AnnotationHub, ExperimentHub(>= 1.7.0), SingleCellExperiment |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | allenpvc_1.4.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/allenpvc |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/allenpvc |
| Package Short Url | https://bioconductor.org/packages/allenpvc/ |
| Package Downloads Report | Download Stats |