==> Synchronizing chroot copy [/home/alhp/workspace/chroot/root] -> [build_a5cfc661-4b40-42c7-888b-b7097f45a2dd]...done ==> Making package: netcdf-fortran-openmpi 4.6.1-2.1 (Mon Feb 10 21:36:08 2025) ==> Retrieving sources... -> Cloning netcdf-fortran git repo... Cloning into bare repository '/home/alhp/workspace/build/x86-64-v4/netcdf-fortran-openmpi-4.6.1-2/netcdf-fortran'... ==> Validating source files with sha256sums... netcdf-fortran ... Passed ==> Making package: netcdf-fortran-openmpi 4.6.1-2.1 (Mon Feb 10 20:36:15 2025) ==> Checking runtime dependencies... ==> Installing missing dependencies... resolving dependencies... looking for conflicting packages... warning: dependency cycle detected: warning: pnetcdf-openmpi will be installed before its netcdf-openmpi dependency Package (14) New Version Net Change extra/hdf5-openmpi 1.14.5-1 10.47 MiB extra/hwloc 2.11.2-1 1.64 MiB extra/libaec 1.1.3-1 0.10 MiB extra/libfabric 2.0.0-1 4.69 MiB core/libnl 3.11.0-1 2.08 MiB extra/libpciaccess 0.18.1-2 0.06 MiB extra/libzip 1.11.2-1 0.46 MiB extra/numactl 2.0.19-1 0.24 MiB extra/openmpi 5.0.6-2 9.92 MiB extra/openpmix 5.0.6-1 3.64 MiB extra/openucx 1.18.0-1 6.33 MiB extra/pnetcdf-openmpi 1.12.3-5 15.75 MiB extra/prrte 3.0.8-1 1.91 MiB extra/netcdf-openmpi 4.9.3-2 2.55 MiB Total Installed Size: 59.85 MiB :: Proceed with installation? [Y/n] checking keyring... checking package integrity... loading package files... checking for file conflicts... :: Processing package changes... installing libaec... installing libpciaccess... installing hwloc... Optional dependencies for hwloc cairo: PDF, Postscript, and PNG export support libxml2: full XML import/export support [installed] installing numactl... installing libfabric... installing libnl... installing openpmix... Optional dependencies for openpmix openpmix-docs: for documentation installing openucx... Optional dependencies for openucx rdma-core: for InfiniBand and RDMA support cuda: for CUDA support rocm-language-runtime: for ROCm support installing prrte... Optional dependencies for prrte openssh: for execution on remote hosts via plm_ssh_agent prrte-docs: for documentation installing openmpi... Optional dependencies for openmpi cuda: cuda support hip-runtime-amd: ROCm support gcc-fortran: fortran support openssh: for execution on remote hosts via plm_ssh_agent openucc: for UCC accelerated collectives installing hdf5-openmpi... installing pnetcdf-openmpi... installing libzip... installing netcdf-openmpi... Optional dependencies for netcdf-openmpi netcdf-fortran: fortran bindings netcdf-cxx: c++ bindings :: Running post-transaction hooks... (1/1) Arming ConditionNeedsUpdate... ==> Checking buildtime dependencies... ==> Installing missing dependencies... resolving dependencies... looking for conflicting packages... Package (22) New Version Net Change extra/clang 19.1.7-1 197.75 MiB extra/compiler-rt 19.1.7-1 43.92 MiB extra/cppdap 1.58.0-2 1.55 MiB core/debuginfod 0.192-4 0.38 MiB extra/fmt 11.1.3-1 0.69 MiB extra/hicolor-icon-theme 0.18-1 0.05 MiB extra/jsoncpp 1.9.6-3 0.77 MiB core/libedit 20240808_3.1-1 0.26 MiB core/libmicrohttpd 1.0.1-1 0.59 MiB extra/libuv 1.50.0-1 0.61 MiB extra/llvm-libs 19.1.7-1 134.51 MiB extra/perl-error 0.17029-7 0.04 MiB extra/perl-mailtools 2.22-1 0.10 MiB extra/perl-timedate 2.33-7 0.08 MiB extra/rhash 1.4.4-1 0.32 MiB extra/spdlog 1.15.1-1 0.66 MiB extra/cmake 3.31.5-1 77.89 MiB extra/doxygen 1.13.2-1 18.60 MiB core/gcc-fortran 14.2.1+r753+g1cd744a6828f-1 44.23 MiB extra/git 2.48.1-1 28.48 MiB core/inetutils 2.5-1 1.07 MiB extra/valgrind 3.24.0-3 72.19 MiB Total Installed Size: 624.76 MiB :: Proceed with installation? [Y/n] checking keyring... checking package integrity... loading package files... checking for file conflicts... :: Processing package changes... installing cppdap... installing hicolor-icon-theme... installing jsoncpp... Optional dependencies for jsoncpp jsoncpp-doc: documentation installing libuv... installing rhash... installing cmake... Optional dependencies for cmake make: for unix Makefile generator [installed] ninja: for ninja generator qt6-base: cmake-gui installing gcc-fortran... installing perl-error... installing perl-timedate... installing perl-mailtools... installing git... Optional dependencies for git tk: gitk and git gui openssh: ssh transport and crypto perl-libwww: git svn perl-term-readkey: git svn and interactive.singlekey setting perl-io-socket-ssl: git send-email TLS support perl-authen-sasl: git send-email TLS support perl-mediawiki-api: git mediawiki support perl-datetime-format-iso8601: git mediawiki support perl-lwp-protocol-https: git mediawiki https support perl-cgi: gitweb (web interface) support python: git svn & git p4 subversion: git svn org.freedesktop.secrets: keyring credential helper libsecret: libsecret credential helper [installed] installing libedit... installing llvm-libs... installing compiler-rt... installing clang... Optional dependencies for clang openmp: OpenMP support in clang with -fopenmp python: for scan-view and git-clang-format llvm: referenced by some clang headers installing fmt... installing spdlog... installing doxygen... Optional dependencies for doxygen graphviz: for caller/callee graph generation qt6-base: for doxywizard texlive-fontsrecommended: for generating LaTeX, Postscript and PDF output texlive-fontutils: for generating LaTeX, Postscript and PDF output texlive-latexextra: for generating LaTeX, Postscript and PDF output texlive-plaingeneric: for generating LaTeX, Postscript and PDF output installing libmicrohttpd... installing debuginfod... Optional dependencies for debuginfod elfutils=0.192: for translations installing valgrind... Optional dependencies for valgrind lib32-glibc: 32-bit ABI support [installed] python: cg_* scripts installing inetutils... :: Running post-transaction hooks... (1/5) Creating system user accounts... Creating group 'git' with GID 972. Creating user 'git' (git daemon user) with UID 972 and GID 972. Creating group '_talkd' with GID 971. Creating user '_talkd' (User for legacy talkd server) with UID 971 and GID 971. (2/5) Reloading system manager configuration... Skipped: Current root is not booted. (3/5) Arming ConditionNeedsUpdate... (4/5) Warn about old perl modules (5/5) Updating the info directory file... ==> Retrieving sources... ==> WARNING: Skipping all source file integrity checks. ==> Extracting sources... -> Creating working copy of netcdf-fortran git repo... Cloning into 'netcdf-fortran'... done. Switched to a new branch 'makepkg' ==> Starting prepare()... ==> Starting build()... -- The C compiler identification is GNU 14.2.1 -- The Fortran compiler identification is GNU 14.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/mpicc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/mpifort - skipped CMake Warning (dev) at CMakeLists.txt:41 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:43 (getuname) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:41 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:44 (getuname) This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at CMakeLists.txt:41 (exec_program): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:45 (getuname) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.13.2") found components: doxygen missing components: dot -- Found m4: /usr/bin/m4 -- Found netCDF CMake package: netCDF::netcdf -- Whether NetCDF-C built with HDF5 enabled: yes -- Looking for alloca.h -- Looking for alloca.h - found -- Looking for malloc.h -- Looking for malloc.h - found -- Looking for ctype.h -- Looking for ctype.h - found -- Looking for dirent.h -- Looking for dirent.h - found -- Looking for dlfcn.h -- Looking for dlfcn.h - found -- Looking for errno.h -- Looking for errno.h - found -- Looking for fcntl.h -- Looking for fcntl.h - found -- Looking for getopt.h -- Looking for getopt.h - found -- Looking for stdbool.h -- Looking for stdbool.h - found -- Looking for locale.h -- Looking for locale.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stdio.h -- Looking for stdio.h - found -- Looking for stdlib.h -- Looking for stdlib.h - found -- Looking for stdarg.h -- Looking for stdarg.h - found -- Looking for strings.h -- Looking for strings.h - found -- Looking for signal.h -- Looking for signal.h - found -- Looking for sys/dir.h -- Looking for sys/dir.h - found -- Looking for sys/ndir.h -- Looking for sys/ndir.h - not found -- Looking for sys/param.h -- Looking for sys/param.h - found -- Looking for sys/stat.h -- Looking for sys/stat.h - found -- Looking for sys/time.h -- Looking for sys/time.h - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for sys/wait.h -- Looking for sys/wait.h - found -- Looking for sys/resource.h -- Looking for sys/resource.h - found -- Looking for inttypes.h -- Looking for inttypes.h - found -- Looking for pstdint.h -- Looking for pstdint.h - not found -- Looking for endian.h -- Looking for endian.h - found -- Looking for BaseTsd.h -- Looking for BaseTsd.h - not found -- Looking for stddef.h -- Looking for stddef.h - found -- Looking for memory.h -- Looking for memory.h - found -- Looking for netcdf.h -- Looking for netcdf.h - found -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of double -- Check size of double - done -- Check size of float -- Check size of float - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of long long -- Check size of long long - done -- Check size of off_t -- Check size of off_t - done -- Check size of off64_t -- Check size of off64_t - failed -- Check size of short -- Check size of short - done -- Check size of size_t -- Check size of size_t - done -- Check size of ssize_t -- Check size of ssize_t - done -- Check size of __int64 -- Check size of __int64 - failed -- Check size of uchar -- Check size of uchar - failed -- Check size of int64_t -- Check size of int64_t - done -- Check size of uint64_t -- Check size of uint64_t - done -- Performing Test COMPILER_HAS_ALLOW_ARGUMENT_MISMATCH -- Performing Test COMPILER_HAS_ALLOW_ARGUMENT_MISMATCH - Success -- Performing Test COMPILER_HAS_MISMATCH_ALL -- Performing Test COMPILER_HAS_MISMATCH_ALL - Failed -- Looking for alloca -- Looking for alloca - not found -- Looking for nccreate in netCDF::netcdf -- Looking for nccreate in netCDF::netcdf - found -- Looking for nc_set_log_level in netCDF::netcdf -- Looking for nc_set_log_level in netCDF::netcdf - found -- Looking for oc_open in netCDF::netcdf -- Looking for oc_open in netCDF::netcdf - found -- Performing Test HAVE_SZIP_WRITE -- Performing Test HAVE_SZIP_WRITE - Success -- Performing Test HAVE_QUANTIZE -- Performing Test HAVE_QUANTIZE - Success -- Looking for nc_def_var_szip in netCDF::netcdf -- Looking for nc_def_var_szip in netCDF::netcdf - found -- Performing Test NC_HAVE_ZSTD -- Performing Test NC_HAVE_ZSTD - Success CMake Warning at CMakeLists.txt:692 (MESSAGE): libnetcdf was built with zstd support, but HDF5_PLUGIN_PATH is not set. Please set the HDF5_PLUGIN_PATH environmental variable if zstandard tests fail, or pass -DDISABLE_ZSTANDARD_PLUGIN=TRUE when running cmake. -- Found MPI_C: /usr/bin/mpicc (found version "3.1") -- Found MPI_Fortran: /usr/bin/mpifort (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Check size of signed char -- Check size of signed char - done Matching Fortran types to C types Matching Fortran types to C types - done -- Whether NetCDF-C built with paralle I/O enabled: yes Create pre-compiled tests. nf_test C_SOURCES: f03lib.c Adding C code for Test nf_test to Library tst_int64 C_SOURCES: tst_f77_v2 C_SOURCES: ftest C_SOURCES: f03lib.c Adding C code for Test ftest to Library -- CMake Summary: -- Build Type: Release -- Building Shared Libraries: ON -- Building netCDF-4: ON -- Building DAP Support: ON -- Logging Support: ON -- Enabling CDF5: TRUE -- Relaxed check NC_EINVALCOORDS: TRUE -- Building Parallel IO: ON -- Using NetCDF4 Parallel IO: TRUE -- Using PnetCDF Parallel IO: TRUE -- Testing Parallel IO: ON -- Linking against: netCDF::netcdf; # NetCDF Fortran Configuration Summary ============================== # General ------- Library Version: 4.6.1 Configured On: Host System: x86_64-Linux-6.12.13-1.1-lts Build Directory: /startdir/src/build Install Prefix: /usr # Compiling Options ----------------- Fortran Compiler: /usr/bin/mpifort FFLAGS: -O3 -pipe -march=x86-64-v4 -ffile-prefix-map=/startdir/src=/usr/src/debug/netcdf-fortran-openmpi -fallow-argument-mismatch LDFLAGS: -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-z,pack-relative-relocs -flto=auto -falign-functions=32 C Compiler: /usr/bin/mpicc CPPFLAGS: CFLAGS: -march=x86-64-v4 -O3 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=3 -Wformat -Werror=format-security -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -mpclmul -g -ffile-prefix-map=/startdir/src=/usr/src/debug/netcdf-fortran-openmpi -flto=auto -falign-functions=32 -g -Wall -Wno-unused-variable -Wno-unused-parameter -O2 Shared Library: yes Static Library: no Extra libraries: -lnetcdf -lnetcdf # Features -------- F03: yes Dap Support: yes Logging Support: yes NetCDF-2 API: yes NetCDF-4 API: yes CDF5 Support: yes Parallel IO: yes NetCDF4 Parallel IO: yes PnetCDF Parallel IO: yes SZIP Write Support: yes Zstandard Support: no Quantize: yes -- ATTENTION: NO HDF5_PLUGIN_PATH SET CMake Warning at CMakeLists.txt:1158 (MESSAGE): libnetcdf was built with zstd support, but HDF5_PLUGIN_PATH is not set. Please set the HDF5_PLUGIN_PATH environmental variable if zstandard tests fail. CMake Warning at CMakeLists.txt:1159 (MESSAGE): You can use `nc-config --plugindir` to determine the appropriate value for HDF5_PLUGIN_PATH -- Configuring done (18.6s) -- Generating done (0.1s) -- Build files have been written to: /startdir/src/build make: Entering directory '/startdir/src/build' [ 0%] Building C object fortran/CMakeFiles/netcdff_c.dir/nf_lib.c.o [ 1%] Building C object fortran/CMakeFiles/netcdff_c.dir/nf_v2compat.c.o [ 1%] Built target netcdff_c [ 2%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nc_data.F90.o [ 3%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nc_interfaces.F90.o [ 4%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf4_nc_interfaces.F90.o [ 4%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nf_data.F90.o [ 5%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf4_nf_interfaces.F90.o [ 6%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_nf_interfaces.F90.o [ 6%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf4_f03.F90.o [ 6%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_f03.F90.o [ 7%] Building Fortran object fortran/CMakeFiles/netcdff.dir/module_netcdf_fortv2_c_interfaces.F90.o [ 7%] Building Fortran object fortran/CMakeFiles/netcdff.dir/typeSizes.F90.o [ 8%] Building Fortran object fortran/CMakeFiles/netcdff.dir/netcdf4.F90.o /startdir/src/netcdf-fortran/fortran/netcdf4_func.F90:797:75: 797 | nf90_inq_var_fill_FourByteReal = nf_inq_var_fill(ncid, varid, no_fill, fill) | 1 ...... 807 | nf90_inq_var_fill_EightByteReal = nf_inq_var_fill(ncid, varid, no_fill, fill) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)). /startdir/src/netcdf-fortran/fortran/netcdf4_func.F90:737:75: 737 | nf90_def_var_fill_FourByteReal = nf_def_var_fill(ncid, varid, no_fill, fill) | 1 ...... 747 | nf90_def_var_fill_EightByteReal = nf_def_var_fill(ncid, varid, no_fill, fill) | 2 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (REAL(4)/REAL(8)). [ 9%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_attio.F90.o [ 10%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_control.F90.o [ 10%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_dim.F90.o [ 11%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_misc.F90.o [ 11%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_genatt.F90.o [ 12%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_geninq.F90.o [ 13%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_genvar.F90.o [ 13%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_vario.F90.o [ 14%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_var1io.F90.o [ 14%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_varaio.F90.o [ 15%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_varmio.F90.o [ 16%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_varsio.F90.o [ 16%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_nc.F90.o [ 17%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_nc4.F90.o [ 17%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_logging.F90.o [ 17%] Building Fortran object fortran/CMakeFiles/netcdff.dir/nf_fortv2.F90.o [ 18%] Linking Fortran shared library libnetcdff.so [ 18%] Built target netcdff [ 19%] Building C object nf_test/CMakeFiles/nf_test_c.dir/f03lib.c.o [ 19%] Built target nf_test_c [ 20%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/f03lib_f_interfaces.F90.o [ 20%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_get.F.o [ 21%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_put.F.o [ 21%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/nf_error.F.o [ 22%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/nf_test.F.o [ 23%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_read.F.o [ 23%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/test_write.F.o [ 24%] Building Fortran object nf_test/CMakeFiles/nf_test.dir/util.F.o [ 24%] Linking Fortran executable nf_test [ 24%] Built target nf_test [ 25%] Building Fortran object nf_test/CMakeFiles/tst_int64.dir/tst_int64.F.o [ 26%] Linking Fortran executable tst_int64 [ 26%] Built target tst_int64 [ 26%] Building Fortran object nf_test/CMakeFiles/tst_f77_v2.dir/tst_f77_v2.F.o [ 27%] Linking Fortran executable tst_f77_v2 [ 27%] Built target tst_f77_v2 [ 28%] Building C object nf_test/CMakeFiles/ftest_c.dir/f03lib.c.o [ 28%] Built target ftest_c [ 29%] Building Fortran object nf_test/CMakeFiles/ftest.dir/ftest.F.o /startdir/src/netcdf-fortran/nf_test/ftest.F:1436:33: 1433 | call ncvgt1(ncid, bid, ix, b, iret) | 2 ...... 1436 | call ncvgt1(ncid, sid, ix, s, iret) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)). /startdir/src/netcdf-fortran/nf_test/ftest.F:224:50: 213 | call ncagt (outcdf, NCBYTE, attnam, bytval, iret) | 2 ...... 224 | call ncagt (outcdf, NCGLOBAL, attnam, shval, iret) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)). /startdir/src/netcdf-fortran/nf_test/ftest.F:1039:47: 1026 | call ncvgt (ncid, m, start, count, barray, iret) | 2 ...... 1039 | call ncvgt (ncid, m, start, count, sarray, iret) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)). /startdir/src/netcdf-fortran/nf_test/ftest.F:1260:43: 1254 | call ncvpt (ncid, bid, start, count, barray, iret) | 2 ...... 1260 | call ncvpt (ncid, sid, start, count, sarray, iret) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)). /startdir/src/netcdf-fortran/nf_test/ftest.F:1366:37: 1360 | call ncvpt1 (ncid, bid, bindx, bvalue, iret) | 2 ...... 1366 | call ncvpt1 (ncid, sid, sindx, svalue, iret) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)). /startdir/src/netcdf-fortran/nf_test/ftest.F:569:72: 559 | call ncapt (ncid, bid, 'validrange', NCBYTE, 2, | 2 ...... 569 | call ncapt (ncid, sid, 'validrange', NCSHORT, 2, | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(1)). [ 29%] Linking Fortran executable ftest [ 29%] Built target ftest [ 29%] Building Fortran object nf03_test/CMakeFiles/tst_f90.dir/tst_f90.F90.o [ 30%] Linking Fortran executable tst_f90 [ 30%] Built target tst_f90 [ 31%] Building Fortran object nf03_test/CMakeFiles/tst_fill_int64.dir/tst_fill_int64.F90.o [ 31%] Linking Fortran executable tst_fill_int64 [ 31%] Built target tst_fill_int64 [ 32%] Building Fortran object nf_test4/CMakeFiles/ftst_parallel.dir/ftst_parallel.F.o [ 32%] Linking Fortran executable ftst_parallel [ 32%] Built target ftst_parallel [ 33%] Building Fortran object nf_test4/CMakeFiles/ftst_parallel_nasa.dir/ftst_parallel_nasa.F.o [ 34%] Linking Fortran executable ftst_parallel_nasa [ 34%] Built target ftst_parallel_nasa [ 34%] Building Fortran object nf_test4/CMakeFiles/ftst_filter.dir/ftst_filter.F.o [ 35%] Linking Fortran executable ftst_filter [ 35%] Built target ftst_filter [ 36%] Building Fortran object nf_test4/CMakeFiles/ftst_groups.dir/ftst_groups.F.o [ 36%] Linking Fortran executable ftst_groups [ 36%] Built target ftst_groups [ 37%] Building Fortran object nf_test4/CMakeFiles/ftst_vars.dir/ftst_vars.F.o [ 38%] Linking Fortran executable ftst_vars [ 38%] Built target ftst_vars [ 38%] Building Fortran object nf_test4/CMakeFiles/ftst_vars2.dir/ftst_vars2.F.o [ 39%] Linking Fortran executable ftst_vars2 [ 39%] Built target ftst_vars2 [ 39%] Building Fortran object nf_test4/CMakeFiles/ftst_vars3.dir/ftst_vars3.F.o [ 40%] Linking Fortran executable ftst_vars3 [ 40%] Built target ftst_vars3 [ 41%] Building Fortran object nf_test4/CMakeFiles/ftst_vars4.dir/ftst_vars4.F.o [ 41%] Linking Fortran executable ftst_vars4 [ 41%] Built target ftst_vars4 [ 42%] Building Fortran object nf_test4/CMakeFiles/ftst_vars5.dir/ftst_vars5.F.o [ 42%] Linking Fortran executable ftst_vars5 [ 42%] Built target ftst_vars5 [ 43%] Building Fortran object nf_test4/CMakeFiles/ftst_vars6.dir/ftst_vars6.F.o [ 44%] Linking Fortran executable ftst_vars6 [ 44%] Built target ftst_vars6 [ 45%] Building Fortran object nf_test4/CMakeFiles/ftst_types.dir/ftst_types.F.o [ 45%] Linking Fortran executable ftst_types [ 45%] Built target ftst_types [ 46%] Building Fortran object nf_test4/CMakeFiles/ftst_types2.dir/ftst_types2.F.o [ 46%] Linking Fortran executable ftst_types2 [ 46%] Built target ftst_types2 [ 47%] Building Fortran object nf_test4/CMakeFiles/ftst_types3.dir/ftst_types3.F.o [ 48%] Linking Fortran executable ftst_types3 [ 48%] Built target ftst_types3 [ 48%] Building Fortran object nf_test4/CMakeFiles/ftst_path.dir/ftst_path.F.o [ 49%] Linking Fortran executable ftst_path [ 49%] Built target ftst_path [ 49%] Building Fortran object nf_test4/CMakeFiles/ftst_rengrps.dir/ftst_rengrps.F.o [ 50%] Linking Fortran executable ftst_rengrps [ 50%] Built target ftst_rengrps [ 51%] Building Fortran object nf_test4/CMakeFiles/f03tst_open_mem.dir/f03tst_open_mem.F.o [ 51%] Linking Fortran executable f03tst_open_mem [ 51%] Built target f03tst_open_mem [ 51%] Building Fortran object nf_test4/CMakeFiles/ftst_var_compact.dir/ftst_var_compact.F.o [ 52%] Linking Fortran executable ftst_var_compact [ 52%] Built target ftst_var_compact [ 52%] Building Fortran object nf_test4/CMakeFiles/ftst_zstandard.dir/ftst_zstandard.F.o [ 53%] Linking Fortran executable ftst_zstandard [ 53%] Built target ftst_zstandard [ 53%] Building Fortran object nf_test4/CMakeFiles/ftst_v2.dir/ftst_v2.F.o [ 54%] Linking Fortran executable ftst_v2 [ 54%] Built target ftst_v2 [ 55%] Building Fortran object nf_test4/CMakeFiles/ftst_var_szip.dir/ftst_var_szip.F.o [ 55%] Linking Fortran executable ftst_var_szip [ 55%] Built target ftst_var_szip [ 55%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel.dir/f90tst_parallel.F90.o [ 56%] Linking Fortran executable f90tst_parallel [ 56%] Built target f90tst_parallel [ 56%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel2.dir/f90tst_parallel2.F90.o [ 57%] Linking Fortran executable f90tst_parallel2 [ 57%] Built target f90tst_parallel2 [ 58%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel3.dir/f90tst_parallel3.F90.o [ 58%] Linking Fortran executable f90tst_parallel3 [ 58%] Built target f90tst_parallel3 [ 59%] Building Fortran object nf03_test4/CMakeFiles/f90tst_nc4_par.dir/f90tst_nc4_par.F90.o [ 60%] Linking Fortran executable f90tst_nc4_par [ 60%] Built target f90tst_nc4_par [ 61%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel_fill.dir/f90tst_parallel_fill.F90.o [ 62%] Linking Fortran executable f90tst_parallel_fill [ 62%] Built target f90tst_parallel_fill [ 63%] Building Fortran object nf03_test4/CMakeFiles/f90tst_parallel_compressed.dir/f90tst_parallel_compressed.F90.o [ 63%] Linking Fortran executable f90tst_parallel_compressed [ 63%] Built target f90tst_parallel_compressed [ 64%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars.dir/f90tst_vars.F90.o [ 65%] Linking Fortran executable f90tst_vars [ 65%] Built target f90tst_vars [ 65%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars_vlen.dir/f90tst_vars_vlen.F90.o [ 66%] Linking Fortran executable f90tst_vars_vlen [ 66%] Built target f90tst_vars_vlen [ 67%] Building Fortran object nf03_test4/CMakeFiles/f90tst_grps.dir/f90tst_grps.F90.o [ 67%] Linking Fortran executable f90tst_grps [ 67%] Built target f90tst_grps [ 68%] Building Fortran object nf03_test4/CMakeFiles/f90tst_fill.dir/f90tst_fill.F90.o [ 68%] Linking Fortran executable f90tst_fill [ 68%] Built target f90tst_fill [ 69%] Building Fortran object nf03_test4/CMakeFiles/f90tst_fill2.dir/f90tst_fill2.F90.o [ 70%] Linking Fortran executable f90tst_fill2 [ 70%] Built target f90tst_fill2 [ 70%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars3.dir/f90tst_vars3.F90.o [ 71%] Linking Fortran executable f90tst_vars3 [ 71%] Built target f90tst_vars3 [ 72%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars4.dir/f90tst_vars4.F90.o [ 72%] Linking Fortran executable f90tst_vars4 [ 72%] Built target f90tst_vars4 [ 72%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars2.dir/f90tst_vars2.F90.o [ 73%] Linking Fortran executable f90tst_vars2 [ 73%] Built target f90tst_vars2 [ 73%] Building Fortran object nf03_test4/CMakeFiles/f90tst_path.dir/f90tst_path.F90.o [ 74%] Linking Fortran executable f90tst_path [ 74%] Built target f90tst_path [ 74%] Building Fortran object nf03_test4/CMakeFiles/f90tst_rengrps.dir/f90tst_rengrps.F90.o [ 75%] Linking Fortran executable f90tst_rengrps [ 75%] Built target f90tst_rengrps [ 76%] Building Fortran object nf03_test4/CMakeFiles/f90tst_nc4.dir/f90tst_nc4.F90.o [ 76%] Linking Fortran executable f90tst_nc4 [ 76%] Built target f90tst_nc4 [ 77%] Building Fortran object nf03_test4/CMakeFiles/f90tst_types.dir/f90tst_types.F90.o [ 77%] Linking Fortran executable f90tst_types [ 77%] Built target f90tst_types [ 78%] Building Fortran object nf03_test4/CMakeFiles/f90tst_types2.dir/f90tst_types2.F90.o [ 78%] Linking Fortran executable f90tst_types2 [ 78%] Built target f90tst_types2 [ 78%] Building Fortran object nf03_test4/CMakeFiles/f90tst_zstandard.dir/f90tst_zstandard.F90.o [ 79%] Linking Fortran executable f90tst_zstandard [ 79%] Built target f90tst_zstandard [ 80%] Building Fortran object nf03_test4/CMakeFiles/f90tst_vars5.dir/f90tst_vars5.F90.o [ 81%] Linking Fortran executable f90tst_vars5 [ 81%] Built target f90tst_vars5 [ 81%] Building Fortran object nf03_test4/CMakeFiles/f90tst_flarge.dir/f90tst_flarge.F90.o [ 82%] Linking Fortran executable f90tst_flarge [ 82%] Built target f90tst_flarge [ 82%] Building Fortran object examples/F77/CMakeFiles/F77_tests_simple_xy_wr.dir/simple_xy_wr.F.o [ 83%] Linking Fortran executable F77_tests_simple_xy_wr [ 83%] Built target F77_tests_simple_xy_wr [ 84%] Building Fortran object examples/F77/CMakeFiles/F77_tests_simple_xy_rd.dir/simple_xy_rd.F.o [ 85%] Linking Fortran executable F77_tests_simple_xy_rd [ 85%] Built target F77_tests_simple_xy_rd [ 86%] Building Fortran object examples/F77/CMakeFiles/F77_tests_sfc_pres_temp_wr.dir/sfc_pres_temp_wr.F.o /startdir/src/netcdf-fortran/examples/F77/sfc_pres_temp_wr.F:126:59: 105 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid, | 2 ...... 126 | retval = nf_def_var(ncid, PRES_NAME, NF_REAL, NDIMS, dimids, | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1) /startdir/src/netcdf-fortran/examples/F77/sfc_pres_temp_wr.F:129:59: 105 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid, | 2 ...... 129 | retval = nf_def_var(ncid, TEMP_NAME, NF_REAL, NDIMS, dimids, | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1) [ 86%] Linking Fortran executable F77_tests_sfc_pres_temp_wr [ 86%] Built target F77_tests_sfc_pres_temp_wr [ 87%] Building Fortran object examples/F77/CMakeFiles/F77_tests_sfc_pres_temp_rd.dir/sfc_pres_temp_rd.F.o [ 87%] Linking Fortran executable F77_tests_sfc_pres_temp_rd [ 87%] Built target F77_tests_sfc_pres_temp_rd [ 87%] Building Fortran object examples/F77/CMakeFiles/F77_tests_pres_temp_4D_wr.dir/pres_temp_4D_wr.F.o /startdir/src/netcdf-fortran/examples/F77/pres_temp_4D_wr.F:149:59: 124 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid, | 2 ...... 149 | retval = nf_def_var(ncid, PRES_NAME, NF_REAL, NDIMS, dimids, | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1) /startdir/src/netcdf-fortran/examples/F77/pres_temp_4D_wr.F:152:59: 124 | retval = nf_def_var(ncid, LAT_NAME, NF_REAL, 1, lat_dimid, | 2 ...... 152 | retval = nf_def_var(ncid, TEMP_NAME, NF_REAL, NDIMS, dimids, | 1 Warning: Rank mismatch between actual argument at (1) and actual argument at (2) (scalar and rank-1) [ 88%] Linking Fortran executable F77_tests_pres_temp_4D_wr [ 88%] Built target F77_tests_pres_temp_4D_wr [ 88%] Building Fortran object examples/F77/CMakeFiles/F77_tests_pres_temp_4D_rd.dir/pres_temp_4D_rd.F.o [ 89%] Linking Fortran executable F77_tests_pres_temp_4D_rd [ 89%] Built target F77_tests_pres_temp_4D_rd [ 89%] Building Fortran object examples/F90/CMakeFiles/F90_tests_simple_xy_wr.dir/simple_xy_wr.F90.o [ 90%] Linking Fortran executable F90_tests_simple_xy_wr [ 90%] Built target F90_tests_simple_xy_wr [ 90%] Building Fortran object examples/F90/CMakeFiles/F90_tests_simple_xy_rd.dir/simple_xy_rd.F90.o [ 91%] Linking Fortran executable F90_tests_simple_xy_rd [ 91%] Built target F90_tests_simple_xy_rd [ 92%] Building Fortran object examples/F90/CMakeFiles/F90_tests_sfc_pres_temp_wr.dir/sfc_pres_temp_wr.F90.o [ 93%] Linking Fortran executable F90_tests_sfc_pres_temp_wr [ 93%] Built target F90_tests_sfc_pres_temp_wr [ 94%] Building Fortran object examples/F90/CMakeFiles/F90_tests_sfc_pres_temp_rd.dir/sfc_pres_temp_rd.F90.o [ 94%] Linking Fortran executable F90_tests_sfc_pres_temp_rd [ 94%] Built target F90_tests_sfc_pres_temp_rd [ 95%] Building Fortran object examples/F90/CMakeFiles/F90_tests_pres_temp_4D_wr.dir/pres_temp_4D_wr.F90.o [ 95%] Linking Fortran executable F90_tests_pres_temp_4D_wr [ 95%] Built target F90_tests_pres_temp_4D_wr [ 95%] Building Fortran object examples/F90/CMakeFiles/F90_tests_pres_temp_4D_rd.dir/pres_temp_4D_rd.F90.o [ 96%] Linking Fortran executable F90_tests_pres_temp_4D_rd [ 96%] Built target F90_tests_pres_temp_4D_rd [ 97%] Building Fortran object examples/F90/CMakeFiles/simple_xy_par_wr.dir/simple_xy_par_wr.F90.o [ 97%] Linking Fortran executable simple_xy_par_wr [ 97%] Built target simple_xy_par_wr [ 98%] Building Fortran object examples/F90/CMakeFiles/simple_xy_par_rd.dir/simple_xy_par_rd.F90.o [ 98%] Linking Fortran executable simple_xy_par_rd [ 98%] Built target simple_xy_par_rd [ 99%] Building Fortran object examples/F90/CMakeFiles/simple_xy_par_wr2.dir/simple_xy_par_wr2.F90.o [100%] Linking Fortran executable simple_xy_par_wr2 [100%] Built target simple_xy_par_wr2 [100%] Built target manpage make: Leaving directory '/startdir/src/build' ==> Starting check()... make: Entering directory '/startdir/src/build' Running tests... Test project /startdir/src/build Start 1: nf_test 1/53 Test #1: nf_test .......................... Passed 0.17 sec Start 2: tst_int64 2/53 Test #2: tst_int64 ........................ Passed 0.06 sec Start 3: tst_f77_v2 3/53 Test #3: tst_f77_v2 ....................... Passed 0.06 sec Start 4: ftest 4/53 Test #4: ftest ............................ Passed 0.06 sec Start 5: tst_f90 5/53 Test #5: tst_f90 .......................... Passed 0.06 sec Start 6: tst_fill_int64 6/53 Test #6: tst_fill_int64 ................... Passed 0.06 sec Start 7: ftst_groups 7/53 Test #7: ftst_groups ...................... Passed 0.09 sec Start 8: ftst_vars 8/53 Test #8: ftst_vars ........................ Passed 0.07 sec Start 9: ftst_vars2 9/53 Test #9: ftst_vars2 ....................... Passed 0.08 sec Start 10: ftst_vars3 10/53 Test #10: ftst_vars3 ....................... Passed 0.07 sec Start 11: ftst_vars4 11/53 Test #11: ftst_vars4 ....................... Passed 0.07 sec Start 12: ftst_vars5 12/53 Test #12: ftst_vars5 ....................... Passed 0.07 sec Start 13: ftst_vars6 13/53 Test #13: ftst_vars6 ....................... Passed 0.07 sec Start 14: ftst_types 14/53 Test #14: ftst_types ....................... Passed 0.07 sec Start 15: ftst_types2 15/53 Test #15: ftst_types2 ...................... Passed 0.07 sec Start 16: ftst_types3 16/53 Test #16: ftst_types3 ...................... Passed 0.07 sec Start 17: ftst_path 17/53 Test #17: ftst_path ........................ Passed 0.08 sec Start 18: ftst_rengrps 18/53 Test #18: ftst_rengrps ..................... Passed 0.08 sec Start 19: f03tst_open_mem 19/53 Test #19: f03tst_open_mem .................. Passed 0.06 sec Start 20: ftst_var_compact 20/53 Test #20: ftst_var_compact ................. Passed 0.07 sec Start 21: ftst_zstandard 21/53 Test #21: ftst_zstandard ................... Passed 0.08 sec Start 22: ftst_v2 22/53 Test #22: ftst_v2 .......................... Passed 0.07 sec Start 23: ftst_var_szip 23/53 Test #23: ftst_var_szip .................... Passed 0.07 sec Start 24: F90_tests_run_f90_par_test 24/53 Test #24: F90_tests_run_f90_par_test .......***Failed 5.00 sec Start 25: f90tst_vars 25/53 Test #25: f90tst_vars ...................... Passed 0.08 sec Start 26: f90tst_vars_vlen 26/53 Test #26: f90tst_vars_vlen ................. Passed 0.01 sec Start 27: f90tst_grps 27/53 Test #27: f90tst_grps ...................... Passed 0.08 sec Start 28: f90tst_fill 28/53 Test #28: f90tst_fill ...................... Passed 0.08 sec Start 29: f90tst_fill2 29/53 Test #29: f90tst_fill2 ..................... Passed 0.08 sec Start 30: f90tst_vars3 30/53 Test #30: f90tst_vars3 ..................... Passed 0.09 sec Start 31: f90tst_vars4 31/53 Test #31: f90tst_vars4 ..................... Passed 0.11 sec Start 32: f90tst_vars2 32/53 Test #32: f90tst_vars2 ..................... Passed 0.07 sec Start 33: f90tst_path 33/53 Test #33: f90tst_path ...................... Passed 0.08 sec Start 34: f90tst_rengrps 34/53 Test #34: f90tst_rengrps ................... Passed 0.07 sec Start 35: f90tst_nc4 35/53 Test #35: f90tst_nc4 ....................... Passed 0.09 sec Start 36: f90tst_types 36/53 Test #36: f90tst_types ..................... Passed 0.08 sec Start 37: f90tst_types2 37/53 Test #37: f90tst_types2 .................... Passed 0.08 sec Start 38: f90tst_zstandard 38/53 Test #38: f90tst_zstandard ................. Passed 0.15 sec Start 39: f90tst_vars5 39/53 Test #39: f90tst_vars5 ..................... Passed 0.12 sec Start 40: f90tst_flarge 40/53 Test #40: f90tst_flarge .................... Passed 2.30 sec Start 41: F77_tests_simple_xy_wr 41/53 Test #41: F77_tests_simple_xy_wr ........... Passed 0.06 sec Start 42: F77_tests_simple_xy_rd 42/53 Test #42: F77_tests_simple_xy_rd ........... Passed 0.06 sec Start 43: F77_tests_sfc_pres_temp_wr 43/53 Test #43: F77_tests_sfc_pres_temp_wr ....... Passed 0.06 sec Start 44: F77_tests_sfc_pres_temp_rd 44/53 Test #44: F77_tests_sfc_pres_temp_rd ....... Passed 0.06 sec Start 45: F77_tests_pres_temp_4D_wr 45/53 Test #45: F77_tests_pres_temp_4D_wr ........ Passed 0.06 sec Start 46: F77_tests_pres_temp_4D_rd 46/53 Test #46: F77_tests_pres_temp_4D_rd ........ Passed 0.06 sec Start 47: F90_tests_simple_xy_wr 47/53 Test #47: F90_tests_simple_xy_wr ........... Passed 0.06 sec Start 48: F90_tests_simple_xy_rd 48/53 Test #48: F90_tests_simple_xy_rd ........... Passed 0.06 sec Start 49: F90_tests_sfc_pres_temp_wr 49/53 Test #49: F90_tests_sfc_pres_temp_wr ....... Passed 0.06 sec Start 50: F90_tests_sfc_pres_temp_rd 50/53 Test #50: F90_tests_sfc_pres_temp_rd ....... Passed 0.06 sec Start 51: F90_tests_pres_temp_4D_wr 51/53 Test #51: F90_tests_pres_temp_4D_wr ........ Passed 0.06 sec Start 52: F90_tests_pres_temp_4D_rd 52/53 Test #52: F90_tests_pres_temp_4D_rd ........ Passed 0.06 sec Start 53: f90_tests_run_f90_par_examples 53/53 Test #53: f90_tests_run_f90_par_examples ... Passed 4.55 sec 98% tests passed, 1 tests failed out of 53 Total Test time (real) = 15.52 sec The following tests FAILED: 24 - F90_tests_run_f90_par_test (Failed) Errors while running CTest Output from these tests are in: /startdir/src/build/Testing/Temporary/LastTest.log Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely. make: *** [Makefile:71: test] Error 8 make: Leaving directory '/startdir/src/build' ==> ERROR: A failure occurred in check(). Aborting... ==> ERROR: Build failed, check /home/alhp/workspace/chroot/build_a5cfc661-4b40-42c7-888b-b7097f45a2dd/build