Class SiftsMappingProvider


  • public class SiftsMappingProvider
    extends java.lang.Object
    • Constructor Detail

      • SiftsMappingProvider

        public SiftsMappingProvider()
    • Method Detail

      • setFileLocation

        public static void setFileLocation​(java.lang.String myFileLocation)
      • getSiftsMapping

        public static java.util.List<SiftsEntity> getSiftsMapping​(java.lang.String pdbId)
                                                           throws java.io.IOException
        Return the SIFTS mappings by getting the info from individual SIFTS xml files at URL "http://ftp.ebi.ac.uk/pub/databases/msd/sifts/xml/%s.xml.gz"
        Parameters:
        pdbId - the pdb identifier
        Returns:
        Throws:
        java.io.IOException - if problems downloading or parsing the file