Class SiftsMappingProvider
- java.lang.Object
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- org.biojava.nbio.structure.io.sifts.SiftsMappingProvider
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public class SiftsMappingProvider extends java.lang.Object
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Constructor Summary
Constructors Constructor Description SiftsMappingProvider()
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static java.util.List<SiftsEntity>
getSiftsMapping(java.lang.String pdbId)
Return the SIFTS mappings by getting the info from individual SIFTS xml files at URL "http://ftp.ebi.ac.uk/pub/databases/msd/sifts/xml/%s.xml.gz"static void
setFileLocation(java.lang.String myFileLocation)
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Method Detail
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setFileLocation
public static void setFileLocation(java.lang.String myFileLocation)
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getSiftsMapping
public static java.util.List<SiftsEntity> getSiftsMapping(java.lang.String pdbId) throws java.io.IOException
Return the SIFTS mappings by getting the info from individual SIFTS xml files at URL "http://ftp.ebi.ac.uk/pub/databases/msd/sifts/xml/%s.xml.gz"- Parameters:
pdbId
- the pdb identifier- Returns:
- Throws:
java.io.IOException
- if problems downloading or parsing the file
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