Genetic code Standard Vertebrate Mitochondrial Yeast Mitochondrial Mold Mitochondrial and Mycoplasma Invertebrate Mitochondrial Ciliate Nuclear Echinoderm Mitochondrial Euplotid Mitochondrial Bacterial and Plant Plastid Alternative Yeast Nuclear Ascidian Mitochondrial Flatworm Mitochondrial Blepharisma Macronuclear Chlorophycean Mitochondrial Trematode Mitochondrial Scenedesmus obliquus Mitochondrial Thraustochytrium Mitochondrial
Codon usage table (scroll for more choices): ------gbbct------ Acholeplasma laidlawii Agrobacterium tumefaciens Bacillus subtilis Bacillus thuringiensis Bartonella bacilliformis Bartonella henselae Brucella abortus Burkholderia glumae Campylobacter jejuni Chlamydia trachomatis Chlorobium limicola Chlorobium vibrioforme Chlorobium tepidum Clostridium botulinum Crenarchaeota Ehrlichia chaffeensis Escherichia coli Euryarchaeota Haemophilus influenzae Halobacterium sp. NRC-1 Helicobacter pylori 26695 Lactobacillus casei Lactococcus lactis subsp. lactis Il1403 Leptospira interrogans Myxococcus xanthus Pantoea agglomerans Paracoccus denitrificans Picrophilus torridus Pseudomonas syringae pv. glycinea Pyrococcus horikoshii OT3 Ralstonia eutropha Rhizobium leguminosarum Rhodobacter sphaeroides Rhodococcus erythropolis Sinorhizobium meliloti Staphylococcus aureus Streptomyces coelicolor Sulfolobus solfataricus Synechococcus sp. Xanthomonas oryzae pv. oryzae Unknown flavobacteria ------gbinv------ Acanthamoeba castellanii Acropora millepora Ancylostoma canium Aplysia californica Artemia franciscana Ascaris suum Bivalve mollusks Blattella germanica Bombyx mori Brugia malayi Caenorhabditis elegans Callinectes sapidus Cephalopods Culex pipiens Dictyostelium discoideum Drosophila melanogaster Encephalitozoon cuniculi GB-M1 Entamoeba histolytica Galleria mellonella Geodia cydonium Giardia intestinalis Haemonchus contortus Helicoverpa armigera Heliothis virescens Heterodera glycines Hirudo medicinalis Hydra vulgaris Lasius niger Leishmania major Leishmania tarentolae Litopenaeus vannamei Lucilia cuprina Lymnaea stagnalis Musca domestica Mytilus edulis Mytilus galloprovincialis Myzus persicae Onchocerca volvulus Placopecten magellanicus Plasmodium falciparum Podocoryne carnea Schistosoma mansoni Strongylocentrotus purpuratus Suberites domuncula Tetrahymena pyriformis Tetrahymena thermophila Trichinella spiralis Trichomonas vaginalis Trypanosoma brucei ------gbmam------ Bos taurus Canis familiaris Equus caballus Oryctolagus cuniculus Ovis aries Sus scrofa ------gbpln------ Alnus glutinosa Antirrhinum majus Arabadopsis thaliana Aspergillus fumigatus Aspergillus nidulans Brassica napus Brassica oleracea Camptotheca acuminata Ceratopteris richardii Chara corallina Chlamydomonas reinhardtii Citrus sinensis Clarkia breweri Clarkia concinna Corylus avellana Dunaliella salina Emericella nidulans Eschscholzia californica Euglena gracilis Fabaceae family Ginkgo biloba Glycine max Gonyaulax polyedra Gossypium hirsutum Hordeum vulgare Lotus corniculatus var. japonicus Lilium longiflorum Lycopersicon esculentum Malus domestica Manihot esculenta Marchantia polymorpha Medicago truncatula Mesembryanthemum crystallinum Mucor circinelloides Mucor racemosus Musa acuminata Neurospora crassa Nicotiana tabacum Oryza sativa Petunia x hybrida Phaseolus vulgaris Physcomitrella patens Pichia angusta Pichia pastoris Pinus strobus Pinus sylvestris Pinus taeda Pisum sativum Pleurotus ostreatus Porphyra pulchra Porphyra yezoensis Prunus persica Ricinus communis Saccharomyces cerevisiae Schizosaccharomyces pombe Sclerotinia sclerotiorum Silene latifolia Solanum tuberosum Sorghum bicolor Trametes versicolor Uncinula necator Ustilago maydis Vitis vinifera Zea mays Zinnia elegans ------gbpri------ Homo sapiens ------gbrod------ Cavia porcellus Mus musculus Rattus norvegicus ------gbvrl------ Chilo iridescent virus Grapevine leafroll-associated virus 2 Human herpesvirus 4 Papaya ringspot virus Vesicular stomatitis virus ------gbvrt------ Ambystoma mexicanum Anas platyrhynchos Cairina moschata Danio rerio Eptatretus stouti Fugu rubripes Gallus gallus Myxine glutinosa Petromyzon marinus Platichthys flesus Trachemys scripta Squalus acanthias Xenopus laevis ------other------ Equal
By default, up to 3 of the least degenerate primers in an overlapping set are shown.
Page last modified Mar 2003