Please note: Please send clear text only.
Please note: Effective 2 May 2002 the #SQ option is required.
Please note: Default options will be used if the message consists solely of a sequence.
Please note: If you want to put comments in the message, start them with # in the first column and put them before the sequence, being careful not to start your comment with any of the reserved words listed below. Nothing should follow the sequence.
Searching options:
#DB PLUS(default) | MINUS(PLUS without biased blocks) | PRINTS
#TY AUTO(default) | AA | DNA
#ST BOTH(default) | FORWARD | REVERSE or 2 | 1 | -1
#GE 0(default) to 8
#OU ALL(default) | SUM | GFF | OLD | RAW
#FO TEXT(default) | HTML
#EX n (default=5)
#SQ Sequence in fasta or other common formats. WARNING: Everything after #SQ is treated as sequence, so do not append any signature, etc.
1. Old defaults; result of just mailing sequence with no lines beginning with "#": #DB plus #TY auto #ST 2 #GE 0 #OU old #FO text #SQ >SPRE_RAT SEPIAPTERIN REDUCTASE (EC 1.1.1.153) (SPR) MEGGRLGCAV CVLTGASRGF GRALAPQLAG LLSPGSVLLL SARSDSMLRQ LKEELCTQQP GLQVVLAAAD LGTESGVQQL LSAVRELPRP ERLQRLLLIN NAGTLGDVSK GFLNINDLAE VNNYWALNLT SMLCLTTGTL NAFSNSPGLS KTVVNISSLC ALQPFKGWGL YCAGKAARDM LYQVLAVEEP SVRVLSYAPG PLDTNMQQLA RETSMDPELR SRLQKLNSEG ELVDCGTSAQ KLLSLLQRDT FQSGAHVDFY DI 2. New searching/post-processing defaults #DB plus #TY auto #ST 2 #GE 0 #EX 5 #OU all #FO text #SQ >SPRE_RAT SEPIAPTERIN REDUCTASE (EC 1.1.1.153) (SPR) MEGGRLGCAV CVLTGASRGF GRALAPQLAG LLSPGSVLLL SARSDSMLRQ LKEELCTQQP GLQVVLAAAD LGTESGVQQL LSAVRELPRP ERLQRLLLIN NAGTLGDVSK GFLNINDLAE VNNYWALNLT SMLCLTTGTL NAFSNSPGLS KTVVNISSLC ALQPFKGWGL YCAGKAARDM LYQVLAVEEP SVRVLSYAPG PLDTNMQQLA RETSMDPELR SRLQKLNSEG ELVDCGTSAQ KLLSLLQRDT FQSGAHVDFY DI 3. New searching/post-processing options #DB prints #TY DNA #ST 1 #GE 1 #EX 3 #OU sum #FO html #SQ gi|8133541|gb|AW507376.1|AW507376 EST00092 Rattus ACATCATGGCTCTGACTTGGGTTAAGCTCTTGGCACCAATGTCCTGACAGGAATGCTGGATGCCAGCAAT CAAATAAGGGACAAACTTGTGGATAGACCCTTTGTCCTGCACTGCCCCTGAAACTCCTTGGGCCACTTTG ATCTTGTCAGCTTCACTGAAATATCGGTTCTGGCTGCTGAGGTGTTTGTCAAGTACATCAAGGAAAAATA CCCCAATCTCCAGGTCATCGGAGGCAATGTAGTCACTGCTGCTCAAGCCAAGAACCTCATCGACGCAGGT GTGGACGCTCTGCGAGTCGGCATGGGAAGTGGTTCCATCTGCATCACCCAGGAAGTGTTGGCCTGTGGGC GACCCCAAGCAACAGCAGTATACAAGGTCTCTGAGTATGCCCGTCGCTTCGGTGTCCCTGGTATTGCTGA TGGAGGAAT