CRAN Package Check Results for Package mapi

Last updated on 2025-10-23 10:48:46 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.4 12.24 241.36 253.60 NOTE
r-devel-linux-x86_64-debian-gcc 1.1.4 10.17 245.01 255.18 OK
r-devel-linux-x86_64-fedora-clang 1.1.4 46.00 272.39 318.39 OK
r-devel-linux-x86_64-fedora-gcc 1.1.4 32.00 320.87 352.87 OK
r-devel-windows-x86_64 1.1.4 20.00 187.00 207.00 OK
r-patched-linux-x86_64 1.1.4 15.00 274.06 289.06 OK
r-release-linux-x86_64 1.1.4 15.69 272.97 288.66 OK
r-release-macos-arm64 1.1.4 6.00 96.00 102.00 OK
r-release-macos-x86_64 1.1.4 17.00 192.00 209.00 ERROR
r-release-windows-x86_64 1.1.4 21.00 189.00 210.00 OK
r-oldrel-macos-arm64 1.1.4 6.00 92.00 98.00 OK
r-oldrel-macos-x86_64 1.1.4 17.00 239.00 256.00 ERROR
r-oldrel-windows-x86_64 1.1.4 25.00 239.00 264.00 OK

Check Details

Version: 1.1.4
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: mapi.html:317:1 (mapi.Rd:174): Warning: missing </ul> before </div> Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [80s/125s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(mapi) > > test_check("mapi") Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Estimated halfwidth: 286.835888 Estimated halfwidth: 143.417944 Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE Building local cartesian grid... ... 1071 cells Building worldwide lat/lon grid... Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084 ... 2432 cells Building local cartesian grid... ... 1071 cells MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.572, system: 0.082, elapsed: 2.464 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 8.618, system: 0.159, elapsed: 9.952 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.173, system: 0.018, elapsed: 0.202 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 3.807, system: 0.301, elapsed: 5.677 seconds] Computing values for grid cells... ... done. [user: 0.157, system: 0.005, elapsed: 0.173 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 14.880, system: 0.602, elapsed: 19.191 seconds] MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.454, system: 0.050, elapsed: 1.724 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 8.641, system: 0.152, elapsed: 10.162 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.163, system: 0.012, elapsed: 0.176 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 2.946, system: 0.157, elapsed: 3.138 seconds] Computing values for grid cells... ... done. [user: 0.132, system: 0.003, elapsed: 0.138 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 13.826, system: 0.396, elapsed: 15.899 seconds] MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.354, system: 0.039, elapsed: 1.464 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 8.698, system: 0.251, elapsed: 11.598 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.165, system: 0.014, elapsed: 0.180 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 3.263, system: 0.262, elapsed: 3.928 seconds] Computing values for grid cells... ... done. [user: 0.141, system: 0.005, elapsed: 0.157 seconds] Starting 4 permutations... ... parallelized over 2 cores ... 1 2 4 3 ... computing probabilities from permuted values ... ... done. [user: 1.087, system: 0.282, elapsed: 0.993 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 15.246, system: 0.922, elapsed: 18.979 seconds] Building local cartesian grid... ... 1071 cells MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.514, system: 0.079, elapsed: 2.067 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 9.546, system: 0.512, elapsed: 17.122 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.190, system: 0.020, elapsed: 0.456 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 4.091, system: 0.374, elapsed: 11.800 seconds] Computing values for grid cells... ... done. [user: 0.180, system: 0.013, elapsed: 0.504 seconds] Starting 50 permutations... ... serially ... | | | 0% | |== | 2% | |=== | 4% | |===== | 6% | |====== | 8% | |======== | 10% | |========== | 12% | |=========== | 14% | |============= | 16% | |============== | 18% | |================ | 20% | |================== | 22% | |=================== | 24% | |===================== | 26% | |====================== | 28% | |======================== | 30% | |========================== | 32% | |=========================== | 34% | |============================= | 36% | |============================== | 38% | |================================ | 40% | |================================== | 42% | |=================================== | 44% | |===================================== | 46% | |====================================== | 48% | |======================================== | 50% | |========================================== | 52% | |=========================================== | 54% | |============================================= | 56% | |============================================== | 58% | |================================================ | 60% | |================================================== | 62% | |=================================================== | 64% | |===================================================== | 66% | |====================================================== | 68% | |======================================================== | 70% | |========================================================== | 72% | |=========================================================== | 74% | |============================================================= | 76% | |============================================================== | 78% | |================================================================ | 80% | |================================================================== | 82% | |=================================================================== | 84% | |===================================================================== | 86% | |====================================================================== | 88% | |======================================================================== | 90% | |========================================================================== | 92% | |=========================================================================== | 94% | |============================================================================= | 96% | |============================================================================== | 98% | |================================================================================| 100% ... computing probabilities from permuted values ... ... done. [user: 10.846, system: 0.883, elapsed: 26.048 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 27.023, system: 1.974, elapsed: 59.715 seconds] Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ... ... 1 upper-tail and 3 lower-tail significant areas returned Building local cartesian grid... ... 1045 cells [ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ──────────────────────── sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`). `actual`: 963429.6 `expected`: 963339.6 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ] Error: Test failures Execution halted Flavor: r-release-macos-x86_64

Version: 1.1.4
Check: tests
Result: ERROR Running ‘testthat.R’ [84s/168s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(mapi) > > test_check("mapi") Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Estimated halfwidth: 286.835888 Estimated halfwidth: 143.417944 Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE Building local cartesian grid... ... 1071 cells Building worldwide lat/lon grid... Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084 ... 2432 cells Building local cartesian grid... ... 1071 cells MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.791, system: 0.119, elapsed: 3.746 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 9.245, system: 0.374, elapsed: 16.025 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.183, system: 0.023, elapsed: 0.232 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 3.785, system: 0.386, elapsed: 7.253 seconds] Computing values for grid cells... ... done. [user: 0.171, system: 0.010, elapsed: 0.259 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 15.729, system: 0.953, elapsed: 28.661 seconds] MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.833, system: 0.131, elapsed: 3.033 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 9.344, system: 0.389, elapsed: 20.736 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.191, system: 0.023, elapsed: 0.569 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 3.878, system: 0.342, elapsed: 10.045 seconds] Computing values for grid cells... ... done. [user: 0.172, system: 0.012, elapsed: 0.331 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 15.985, system: 0.974, elapsed: 36.027 seconds] MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.702, system: 0.092, elapsed: 3.728 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 9.435, system: 0.388, elapsed: 20.083 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.194, system: 0.022, elapsed: 0.350 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 3.724, system: 0.301, elapsed: 6.766 seconds] Computing values for grid cells... ... done. [user: 0.175, system: 0.017, elapsed: 0.359 seconds] Starting 4 permutations... ... parallelized over 2 cores ... 1 2 4 3 ... computing probabilities from permuted values ... ... done. [user: 1.117, system: 0.323, elapsed: 1.800 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 16.983, system: 1.206, elapsed: 34.277 seconds] Building local cartesian grid... ... 1071 cells MAPI COMPUTATION STARTED Checking data... `metric` provided as a vector Unique names ... OK All samples used in metric ... OK ... 200 samples and 39800 metric left. Building 20100 elliptical polygons... ... 20100 ellipses. [user: 1.570, system: 0.061, elapsed: 3.329 seconds] Computing spatial intersection between 1071 grid cells and 20100 ellipses... ... done. [user: 9.137, system: 0.184, elapsed: 18.878 seconds] Building sample pairs... ... 39800 sample pairs. [user: 0.186, system: 0.019, elapsed: 0.789 seconds] Matching grid cells with sample pairs... ... 2295394 matches found. [user: 3.720, system: 0.294, elapsed: 10.781 seconds] Computing values for grid cells... ... done. [user: 0.174, system: 0.008, elapsed: 0.340 seconds] Starting 50 permutations... ... serially ... | | | 0% | |== | 2% | |=== | 4% | |===== | 6% | |====== | 8% | |======== | 10% | |========== | 12% | |=========== | 14% | |============= | 16% | |============== | 18% | |================ | 20% | |================== | 22% | |=================== | 24% | |===================== | 26% | |====================== | 28% | |======================== | 30% | |========================== | 32% | |=========================== | 34% | |============================= | 36% | |============================== | 38% | |================================ | 40% | |================================== | 42% | |=================================== | 44% | |===================================== | 46% | |====================================== | 48% | |======================================== | 50% | |========================================== | 52% | |=========================================== | 54% | |============================================= | 56% | |============================================== | 58% | |================================================ | 60% | |================================================== | 62% | |=================================================== | 64% | |===================================================== | 66% | |====================================================== | 68% | |======================================================== | 70% | |========================================================== | 72% | |=========================================================== | 74% | |============================================================= | 76% | |============================================================== | 78% | |================================================================ | 80% | |================================================================== | 82% | |=================================================================== | 84% | |===================================================================== | 86% | |====================================================================== | 88% | |======================================================================== | 90% | |========================================================================== | 92% | |=========================================================================== | 94% | |============================================================================= | 96% | |============================================================================== | 98% | |================================================================================| 100% ... computing probabilities from permuted values ... ... done. [user: 10.218, system: 0.630, elapsed: 22.000 seconds] MAPI COMPUTATION ENDED. [TOTAL: user: 25.670, system: 1.255, elapsed: 57.920 seconds] Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ... ... 1 upper-tail and 3 lower-tail significant areas returned Building local cartesian grid... ... 1045 cells [ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ──────────────────────── sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`). `actual`: 963429.6 `expected`: 963339.6 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ] Error: Test failures Execution halted Flavor: r-oldrel-macos-x86_64