Last updated on 2025-10-23 10:48:46 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.24 | 241.36 | 253.60 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.17 | 245.01 | 255.18 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 46.00 | 272.39 | 318.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 320.87 | 352.87 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.69 | 272.97 | 288.66 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 17.00 | 192.00 | 209.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 17.00 | 239.00 | 256.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: HTML version of manual
Result: NOTE
Found the following HTML validation problems:
mapi.html:317:1 (mapi.Rd:174): Warning: missing </ul> before </div>
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.082, elapsed: 2.464 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.618, system: 0.159, elapsed: 9.952 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.173, system: 0.018, elapsed: 0.202 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.807, system: 0.301, elapsed: 5.677 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.005, elapsed: 0.173 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.880, system: 0.602, elapsed: 19.191 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.454, system: 0.050, elapsed: 1.724 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.641, system: 0.152, elapsed: 10.162 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.163, system: 0.012, elapsed: 0.176 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 2.946, system: 0.157, elapsed: 3.138 seconds]
Computing values for grid cells...
... done. [user: 0.132, system: 0.003, elapsed: 0.138 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 13.826, system: 0.396, elapsed: 15.899 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.354, system: 0.039, elapsed: 1.464 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.698, system: 0.251, elapsed: 11.598 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.165, system: 0.014, elapsed: 0.180 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.263, system: 0.262, elapsed: 3.928 seconds]
Computing values for grid cells...
... done. [user: 0.141, system: 0.005, elapsed: 0.157 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.087, system: 0.282, elapsed: 0.993 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.246, system: 0.922, elapsed: 18.979 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.079, elapsed: 2.067 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.546, system: 0.512, elapsed: 17.122 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.020, elapsed: 0.456 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.091, system: 0.374, elapsed: 11.800 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.013, elapsed: 0.504 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.846, system: 0.883, elapsed: 26.048 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.023, system: 1.974, elapsed: 59.715 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/168s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.791, system: 0.119, elapsed: 3.746 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.245, system: 0.374, elapsed: 16.025 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.023, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.785, system: 0.386, elapsed: 7.253 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.010, elapsed: 0.259 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.729, system: 0.953, elapsed: 28.661 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.833, system: 0.131, elapsed: 3.033 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.344, system: 0.389, elapsed: 20.736 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.023, elapsed: 0.569 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.878, system: 0.342, elapsed: 10.045 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.012, elapsed: 0.331 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.985, system: 0.974, elapsed: 36.027 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.702, system: 0.092, elapsed: 3.728 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.435, system: 0.388, elapsed: 20.083 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.022, elapsed: 0.350 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.724, system: 0.301, elapsed: 6.766 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.017, elapsed: 0.359 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.117, system: 0.323, elapsed: 1.800 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.983, system: 1.206, elapsed: 34.277 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.570, system: 0.061, elapsed: 3.329 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.137, system: 0.184, elapsed: 18.878 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.019, elapsed: 0.789 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.720, system: 0.294, elapsed: 10.781 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.008, elapsed: 0.340 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.218, system: 0.630, elapsed: 22.000 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.670, system: 1.255, elapsed: 57.920 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64