Last updated on 2025-10-26 10:49:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.13 | 252.16 | 265.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.09 | 267.58 | 277.67 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 58.00 | 285.70 | 343.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 85.00 | 308.08 | 393.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.00 | 274.06 | 289.06 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.93 | 258.75 | 273.68 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 22.00 | 334.00 | 356.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 194.00 | 214.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 23.00 | 361.00 | 384.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 239.00 | 263.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [91s/263s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.720, system: 0.113, elapsed: 6.366 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.083, system: 0.311, elapsed: 19.527 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.030, elapsed: 0.588 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.095, system: 0.436, elapsed: 11.206 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.010, elapsed: 0.385 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.973, system: 1.367, elapsed: 41.372 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.617, system: 0.090, elapsed: 2.953 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.245, system: 0.334, elapsed: 19.800 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.032, elapsed: 0.538 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.052, system: 0.374, elapsed: 9.883 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.008, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.930, system: 1.138, elapsed: 35.430 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.464, system: 0.056, elapsed: 1.711 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.611, system: 0.510, elapsed: 29.983 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.041, elapsed: 0.555 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.467, system: 0.633, elapsed: 16.889 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.015, elapsed: 0.706 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.325, system: 0.334, elapsed: 2.859 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.020, system: 1.997, elapsed: 55.544 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.825, system: 0.137, elapsed: 7.390 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.502, system: 0.383, elapsed: 37.411 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.038, elapsed: 1.659 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.258, system: 0.429, elapsed: 18.976 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.011, elapsed: 0.698 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.306, system: 1.125, elapsed: 42.282 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.077, system: 2.561, elapsed: 114.685 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/269s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.924, system: 0.146, elapsed: 7.401 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.877, system: 0.603, elapsed: 35.515 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.034, elapsed: 0.518 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.103, system: 0.487, elapsed: 10.944 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.025, elapsed: 0.715 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.975, system: 1.641, elapsed: 57.823 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.008, system: 0.175, elapsed: 5.099 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.807, system: 0.565, elapsed: 30.301 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.032, elapsed: 0.468 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.103, system: 0.451, elapsed: 12.554 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.017, elapsed: 0.652 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.966, system: 1.590, elapsed: 51.694 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.775, system: 0.106, elapsed: 8.272 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.580, system: 0.427, elapsed: 29.261 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.039, elapsed: 0.573 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.134, system: 0.505, elapsed: 11.813 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.029, elapsed: 0.449 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.161, system: 0.374, elapsed: 2.313 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.809, system: 1.939, elapsed: 56.518 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.679, system: 0.086, elapsed: 5.517 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.430, system: 0.285, elapsed: 30.774 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.042, elapsed: 0.576 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.094, system: 0.397, elapsed: 13.056 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.014, elapsed: 0.482 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.097, system: 1.039, elapsed: 32.380 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.504, system: 2.250, elapsed: 86.055 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64