cyclicNullR             Create a cyclic shift-based null distribution
                        for one or two copy number matrices
cyclicShiftColR         Perform the cyclic shift procedure on the
                        columns of a matrix
dataPrep                Prepare copy number data for downstream
                        analysis
findNull                Find DiNAMIC's null distribution
genomeChrPlot           A Function for Plotting Mean Copy Number Values
                        and Differences Across Multiple Chromosomes
genomePlot              A Function for Plotting Mean Copy Number Values
                        and Differences Across the Genome
luadSubset              DNA copy number data for lung adenocarcinoma.
luscSubset              DNA copy number data for lung squamous cell
                        carcinoma.
pD                      Prepped data for DiNAMIC.Duo.
peelingOne              A Function to Apply the Peeling Algorithm in a
                        Single Copy Number Matrix
peelingOneIterate       A Function to Apply the Peeling Algorithm in a
                        Single Copy Number Matrix
peelingTwo              A Function to Apply the Peeling Algorithm in a
                        Two Copy Number Matrices
peelingTwoIterate       A Function to Apply the Peeling Algorithm for
                        Two Copy Number Matrices
resultsProcess          Processing peeling results
