* using log directory 'd:/Rcompile/CRANpkg/local/4.6/deepdep.Rcheck'
* using R Under development (unstable) (2025-07-21 r88439 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'deepdep/DESCRIPTION' ... OK
* this is package 'deepdep' version '0.4.3'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'deepdep' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s] OK
* checking whether the package can be unloaded cleanly ... [0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s] OK
* checking loading without being on the library search path ... [0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [3s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [1s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [12s] ERROR
  Running 'spelling.R' [0s]
  Running 'testthat.R' [12s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(deepdep)
  > 
  > test_check("deepdep")
  [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ]
  
  ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
  • On CRAN (1): 'test-plot_downloads.R:8:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-deepdep.R:33:5'): obtaining Bioc dependencies returns objects of correct types ──
  Error in `value[[3L]](cond)`: incorrect number of dimensions
  Backtrace:
      ▆
   1. ├─vcr::use_cassette(...) at test-deepdep.R:32:3
   2. │ └─cassette$call_block(...)
   3. └─deepdep (local) deepdep_wrapped(...) at test-deepdep.R:33:5
   4.   └─base::tryCatch(...) at test-deepdep.R:3:3
   5.     └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   6.       └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   7.         └─value[[3L]](cond)
  ── Error ('test-deepdep.R:55:5'): packages with no dependencies return empty deepdep object in result ──
  Error: parse error: premature EOF
                                         
                       (right here) ------^
  
  Backtrace:
       ▆
    1. ├─vcr::use_cassette(...) at test-deepdep.R:54:3
    2. │ └─cassette$call_block(...)
    3. └─deepdep::deepdep("rlang") at test-deepdep.R:55:5
    4.   └─deepdep::deepdep(...) at D:\RCompile\CRANpkg\local\4.6\deepdep.Rcheck\tests\testthat\setup-deepdep.R:6:3
    5.     └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type)
    6.       └─deepdep::get_description(package, bioc, local)
    7.         └─deepdep:::get_desc_cached(package, "CRAN")
    8.           └─deepdep:::append_desc_CRAN(package, descs)
    9.             └─deepdep:::DB(package)
   10.               └─jsonlite::prettify(ret)
   11.                 └─jsonlite:::reformat(txt, TRUE, indent_string)
   12.                   └─jsonlite:::stop(out[[2]], call. = FALSE)
  ── Error ('test-deepdep_declutter.R:2:3'): (code run outside of `test_that()`) ──
  Error: parse error: premature EOF
                                         
                       (right here) ------^
  
  Backtrace:
       ▆
    1. ├─vcr::use_cassette(...) at test-deepdep_declutter.R:1:1
    2. │ └─cassette$call_block(...)
    3. └─deepdep::deepdep("R6", depth = 3, dependency_type = "all") at test-deepdep_declutter.R:2:3
    4.   └─deepdep::deepdep(...) at D:\RCompile\CRANpkg\local\4.6\deepdep.Rcheck\tests\testthat\setup-deepdep.R:6:3
    5.     └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type)
    6.       └─deepdep::get_description(package, bioc, local)
    7.         └─deepdep:::get_desc_cached(package, "CRAN")
    8.           └─deepdep:::append_desc_CRAN(package, descs)
    9.             └─deepdep:::DB(package)
   10.               └─jsonlite::prettify(ret)
   11.                 └─jsonlite:::reformat(txt, TRUE, indent_string)
   12.                   └─jsonlite:::stop(out[[2]], call. = FALSE)
  ── Error ('test-plot.R:15:3'): (code run outside of `test_that()`) ─────────────
  Error: parse error: premature EOF
                                         
                       (right here) ------^
  
  Backtrace:
       ▆
    1. ├─vcr::use_cassette(...) at test-plot.R:14:1
    2. │ └─cassette$call_block(...)
    3. └─deepdep::deepdep("shiny", depth = 2) at test-plot.R:15:3
    4.   └─deepdep::deepdep(...) at D:\RCompile\CRANpkg\local\4.6\deepdep.Rcheck\tests\testthat\setup-deepdep.R:6:3
    5.     └─deepdep::get_dependencies(package, downloads, bioc, local, dependency_type)
    6.       └─deepdep::get_description(package, bioc, local)
    7.         └─deepdep:::get_desc_cached(package, "CRAN")
    8.           └─deepdep:::append_desc_CRAN(package, descs)
    9.             └─deepdep:::DB(package)
   10.               └─jsonlite::prettify(ret)
   11.                 └─jsonlite:::reformat(txt, TRUE, indent_string)
   12.                   └─jsonlite:::stop(out[[2]], call. = FALSE)
  
  [ FAIL 4 | WARN 0 | SKIP 1 | PASS 21 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [4s] OK
* checking PDF version of manual ... [27s] OK
* checking HTML version of manual ... [2s] OK
* DONE
Status: 1 ERROR