Implements various tests, visualizations, and metrics
for diagnosing convergence of MCMC chains in phylogenetics. It implements
and automates many of the functions of the AWTY package in the R
environment, as well as a host of other functions. Warren, Geneva, and Lanfear (2017), <doi:10.1093/molbev/msw279>.
| Version: |
1.0.3 |
| Depends: |
R (≥ 3.3.0), ape, ggplot2 |
| Imports: |
reshape2, phangorn, coda, viridis, grid, plyr, ggdendro, GGally, parallel, TreeDist |
| Suggests: |
knitr, testthat, markdown, rmarkdown, stringi |
| Published: |
2025-03-27 |
| DOI: |
10.32614/CRAN.package.rwty |
| Author: |
Dan Warren [aut, cre],
Anthony Geneva [aut],
Rob Lanfear [aut],
Luke Harmon [ctb],
April Wright [ctb],
Diego Mallo [ctb],
Klaus Schliep [ctb],
Kelly Luke [ctb],
Kendall Michelle [ctb],
Smith Martin [ctb] |
| Maintainer: |
Dan Warren <dan.l.warren at gmail.com> |
| License: |
GPL-2 |
| NeedsCompilation: |
no |
| Citation: |
rwty citation info |
| Materials: |
README |
| CRAN checks: |
rwty results |