## ----setup, include = FALSE--------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>", echo = TRUE, message = F, warning = F ) library(jstable) library(survival) library(dplyr) ## ----------------------------------------------------------------------------- data <- mgus2 data$etime <- with(data, ifelse(pstat == 0, futime, ptime)) data$event <- with(data, ifelse(pstat == 0, 2 * death, 1)) data$event <- factor(data$event, 0:2, labels = c("censor", "pcm", "death")) data$age65 <- with(data, ifelse(age > 65, 1, 0)) data$age65 <- factor(data$age65) pdata <- survival::finegray(survival::Surv(etime, event) ~ ., data = data) TableSubgroupMultiCox(formula = Surv(fgstart, fgstop, fgstatus) ~ sex, data = pdata, var_cov = "age", weights = "fgwt", var_subgroups = c("age65")) ## ----------------------------------------------------------------------------- fgfit <- coxph(Surv(fgstart, fgstop, fgstatus) ~ age + sex, weight = fgwt, data = pdata, model = T ) cox2.display(fgfit)