immundata: A Unified Data Layer for Large-Scale Single-Cell, Spatial and Bulk Immunomics

Provides a unified data layer for single-cell, spatial and bulk T-cell and B-cell immune receptor repertoire data. Think AnnData or SeuratObject, but for AIRR data, a.k.a. Adaptive Immune Receptor Repertoire, VDJ-seq, RepSeq, or VDJ sequencing data.

Version:	0.0.5
Depends:	R (≥ 4.1.0), dplyr, duckplyr (≥ 1.1.0)
Imports:	checkmate, cli, dbplyr, ggplot2, glue, jsonlite (≥ 2.0.0), lifecycle, R6, readr, rlang, tibble, tools, utils
Suggests:	rmarkdown, testthat (≥ 3.0.0), Seurat
Published:	2025-10-09
DOI:	10.32614/CRAN.package.immundata
Author:	Vadim I. Nazarov [aut, cre]
Maintainer:	Vadim I. Nazarov <support at immunomind.com>
Contact:	support@immunomind.com
BugReports:	https://github.com/immunomind/immundata/issues
License:	Apache License (≥ 2)
URL:	https://immunomind.github.io/docs/, https://github.com/immunomind/immundata
NeedsCompilation:	no
Materials:	README
CRAN checks:	immundata results

Documentation:

Reference manual:

immundata.html , immundata.pdf

Downloads:

Package source:	immundata_0.0.5.tar.gz
Windows binaries:	r-devel: immundata_0.0.5.zip, r-release: immundata_0.0.5.zip, r-oldrel: immundata_0.0.5.zip
macOS binaries:	r-release (arm64): immundata_0.0.5.tgz, r-oldrel (arm64): immundata_0.0.5.tgz, r-release (x86_64): immundata_0.0.5.tgz, r-oldrel (x86_64): immundata_0.0.5.tgz
Old sources:	immundata archive

Reverse dependencies:

Reverse depends:

immunarch

Linking:

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