## ----include = FALSE----------------------------------------------------------
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)

## ----setup, echo = FALSE------------------------------------------------------
library(fcaR)

## ----echo = FALSE-------------------------------------------------------------
# Nominal
A_nom <- matrix(c("yes", "yes", "no", "yes", "no"), ncol = 1)
colnames(A_nom) <- "Grant"
rownames(A_nom) <- paste0("Student ", seq(nrow(A_nom)))

# Ordinal
A_ord <- matrix(c(7, 10, 5, 8, 4), ncol = 1)
colnames(A_ord) <- "Intern"
rownames(A_ord) <- paste0("Student ", seq(nrow(A_ord)))

# Interordinal
A_int <- matrix(c("agree", "strongly agree", "neither agree nor disagree", "agree", "disagree"), ncol = 1)
colnames(A_int) <- "Agreement"
rownames(A_int) <- paste0("Student ", seq(nrow(A_int)))

# Biordinal
A_bi <- matrix(c("working", "hard working", "working", "working", "lazy"), ncol = 1)
colnames(A_bi) <- "Attitude"
rownames(A_bi) <- paste0("Student ", seq(nrow(A_bi)))

# Interval
A_interv <- matrix(c(2.7, 4.1, 3.6, 4, 3.6), ncol = 1)
colnames(A_interv) <- "Score"
rownames(A_interv) <- paste0("Student ", seq(nrow(A_interv)))

# Aposition
A <- data.frame(A_nom, A_ord, A_int, A_bi, A_interv)
fc <- FormalContext$new(A)

## ----echo = FALSE-------------------------------------------------------------
fc$incidence() %>% 
  knitr::kable(format = "html",
               align = "rcccc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom <- FormalContext$new(A_nom)
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "r")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$scale("Grant", type = "nominal")
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$get_scales("Grant")$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom <- FormalContext$new(A_ord)
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "c")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$scale("Intern", type = "ordinal")
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$get_scales("Intern")$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom <- FormalContext$new(A_int)
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "c")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$scale("Agreement", 
             type = "interordinal",
             values = c("strongly disagree",
                        "disagree",
                        "neither agree nor disagree",
                        "agree",
                        "strongly agree"))
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$get_scales("Agreement")$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom <- FormalContext$new(A_bi)
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "c")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$scale("Attitude", 
             type = "biordinal", 
             values_le = c("hard working", "working"),
             values_ge = c("lazy", "very lazy"))
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$get_scales("Attitude")$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom <- FormalContext$new(A_interv)
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "c")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$scale("Score", 
             type = "interval", 
             values = c(2, 3, 4, 5), interval_names = c("C", "B", "A"))
fc_nom$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## ----echo = FALSE-------------------------------------------------------------
fc_nom$get_scales("Score")$incidence() %>% 
  knitr::kable(format = "html",
               align = "cc")

## -----------------------------------------------------------------------------
scalingRegistry$get_entry_names()

## -----------------------------------------------------------------------------
fc$scale("Grant", type = "nominal")
fc

## -----------------------------------------------------------------------------
fc$scale("Intern", type = "ordinal")
fc

## -----------------------------------------------------------------------------
fc$scale("Agreement", 
         type = "interordinal",
         values = c("strongly disagree",
                    "disagree",
                    "neither agree nor disagree",
                    "agree",
                    "strongly agree"))

## -----------------------------------------------------------------------------
fc$scale("Attitude", 
         type = "biordinal", 
         values_le = c("hard working", "working"),
         values_ge = c("lazy", "very lazy"))

## -----------------------------------------------------------------------------
fc$scale("Score", 
         type = "interval", 
         values = c(2, 3, 4, 5), 
         interval_names = c("C", "B", "A"))

## -----------------------------------------------------------------------------
fc$get_scales(c("Grant", "Score"))

## -----------------------------------------------------------------------------
fc$background_knowledge()

## ----imps, warning=FALSE------------------------------------------------------
fc$find_implications()
fc$implications

## ----echo = FALSE-------------------------------------------------------------
filename <- system.file("contexts",
                        "aromatic.csv",
                        package = "fcaR")

fc_orig <- FormalContext$new(filename)

## -----------------------------------------------------------------------------
filename <- system.file("contexts",
                        "aromatic.csv",
                        package = "fcaR")

fc <- FormalContext$new(filename)

## -----------------------------------------------------------------------------
fc$incidence() %>% 
  knitr::kable(format = "html",
               align = "c")

## -----------------------------------------------------------------------------
fc$scale(attributes = "nitro", 
         type = "ordinal", 
         comparison = `>=`, 
         values = 1:3)
fc$scale(attributes = "OS", 
         type = "nominal", 
         c("O", "S"))
fc$scale(attributes = "ring", 
         type = "nominal")

## ----echo = FALSE-------------------------------------------------------------
fc$incidence() %>% 
  knitr::kable(format = "html",
               align = "c")

## -----------------------------------------------------------------------------
fc$background_knowledge()

## ----warning=FALSE------------------------------------------------------------
fc$find_implications()
fc$implications

## -----------------------------------------------------------------------------
fc$concepts