Last updated on 2025-11-17 09:49:47 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 11.86 | 248.50 | 260.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.27 | 240.67 | 250.94 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.43 | 249.95 | 264.38 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.55 | 304.46 | 319.01 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 193.00 | 205.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 173.00 | 185.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 230.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/144s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.052, elapsed: 2.738 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.534, system: 0.163, elapsed: 13.316 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.015, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.975, system: 0.245, elapsed: 5.480 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.005, elapsed: 0.195 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.073, system: 0.511, elapsed: 22.851 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.726, system: 0.073, elapsed: 2.480 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.827, system: 0.329, elapsed: 15.206 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.018, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.306, system: 0.298, elapsed: 7.486 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.010, elapsed: 0.386 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.794, system: 0.762, elapsed: 26.710 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.770, system: 0.079, elapsed: 2.770 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.719, system: 0.253, elapsed: 20.937 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.012, elapsed: 0.666 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.084, system: 0.244, elapsed: 11.215 seconds]
Computing values for grid cells...
... done. [user: 0.201, system: 0.025, elapsed: 0.480 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.294, system: 0.279, elapsed: 1.778 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.933, system: 0.946, elapsed: 39.419 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.708, system: 0.079, elapsed: 3.313 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.942, system: 0.383, elapsed: 15.238 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.019, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.051, system: 0.211, elapsed: 7.978 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.263 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.764, system: 0.528, elapsed: 18.599 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.523, system: 1.265, elapsed: 46.825 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.759, system: 0.077, elapsed: 2.728 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.706, system: 0.273, elapsed: 14.231 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.022, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.998, system: 0.309, elapsed: 5.522 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.012, elapsed: 0.254 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.402, system: 0.731, elapsed: 23.881 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.843, system: 0.087, elapsed: 2.338 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.322, system: 0.256, elapsed: 10.393 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.018, elapsed: 0.258 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.944, system: 0.274, elapsed: 4.843 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.008, elapsed: 0.205 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.016, system: 0.684, elapsed: 18.731 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.794, system: 0.081, elapsed: 2.203 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.681, system: 0.253, elapsed: 13.439 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.271 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.652, system: 0.169, elapsed: 4.225 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.173 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.094, system: 0.255, elapsed: 1.018 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.233, system: 0.813, elapsed: 22.126 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.037, elapsed: 2.219 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.531, system: 0.128, elapsed: 14.603 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.838, system: 0.186, elapsed: 6.605 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.351 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.764, system: 0.497, elapsed: 23.622 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.774, system: 0.889, elapsed: 48.667 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64