Last updated on 2025-11-13 09:50:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.19 | 253.41 | 266.60 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.81 | 236.45 | 247.26 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.43 | 249.95 | 264.38 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 270.07 | 284.27 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 186.00 | 198.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 193.00 | 206.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 235.00 | 259.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/138s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.059, elapsed: 2.328 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.648, system: 0.190, elapsed: 13.524 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.017, elapsed: 0.254 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.259, system: 0.311, elapsed: 6.373 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.008, elapsed: 0.267 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.424, system: 0.614, elapsed: 23.540 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.713, system: 0.078, elapsed: 2.464 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.762, system: 0.298, elapsed: 15.654 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.019, elapsed: 0.397 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.223, system: 0.296, elapsed: 7.161 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.615, system: 0.734, elapsed: 26.759 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.814, system: 0.087, elapsed: 2.696 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.820, system: 0.352, elapsed: 13.456 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.023, elapsed: 0.310 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.058, system: 0.278, elapsed: 4.940 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.007, elapsed: 0.191 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.200, system: 0.268, elapsed: 1.031 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.895, system: 1.048, elapsed: 23.359 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.624, system: 0.065, elapsed: 1.817 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.926, system: 0.380, elapsed: 13.618 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.011, elapsed: 0.586 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.075, system: 0.219, elapsed: 13.671 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.010, elapsed: 0.529 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.904, system: 0.493, elapsed: 25.851 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.540, system: 1.212, elapsed: 57.555 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/141s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.043, elapsed: 2.376 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.558, system: 0.091, elapsed: 14.944 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.013, elapsed: 0.343 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.789, system: 0.188, elapsed: 6.589 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.006, elapsed: 0.282 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.959, system: 0.367, elapsed: 25.432 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.032, elapsed: 2.168 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.584, system: 0.101, elapsed: 13.688 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.016, elapsed: 0.374 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.916, system: 0.231, elapsed: 6.913 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.005, elapsed: 0.244 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.101, system: 0.425, elapsed: 24.316 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.652, system: 0.052, elapsed: 2.087 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.662, system: 0.199, elapsed: 15.082 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.013, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.922, system: 0.186, elapsed: 5.766 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.005, elapsed: 0.446 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.145, system: 0.219, elapsed: 1.943 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.415, system: 0.719, elapsed: 26.840 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.661, system: 0.039, elapsed: 4.630 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.608, system: 0.091, elapsed: 22.493 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.380 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.875, system: 0.185, elapsed: 7.470 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.383 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.719, system: 0.499, elapsed: 17.859 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.913, system: 0.864, elapsed: 54.820 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64