Last updated on 2025-11-26 09:51:20 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.71 | 226.48 | 237.19 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 22.00 | 301.00 | 323.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 18.00 | 278.00 | 296.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 237.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [96s/220s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.836, system: 0.102, elapsed: 4.240 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.210, system: 0.357, elapsed: 34.722 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.028, elapsed: 0.873 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.296, system: 0.371, elapsed: 14.251 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.012, elapsed: 0.566 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.446, system: 1.312, elapsed: 57.958 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.730, system: 0.100, elapsed: 5.274 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.112, system: 0.357, elapsed: 27.734 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.032, elapsed: 0.579 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.364, system: 0.467, elapsed: 10.770 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.007, elapsed: 0.313 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.292, system: 1.387, elapsed: 47.470 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.928, system: 0.134, elapsed: 4.412 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.152, system: 0.368, elapsed: 17.369 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.030, elapsed: 0.323 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.464, system: 0.394, elapsed: 8.037 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.006, elapsed: 0.297 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.291, system: 0.319, elapsed: 1.427 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.992, system: 1.555, elapsed: 33.750 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.777, system: 0.088, elapsed: 4.442 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.096, system: 0.294, elapsed: 22.428 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.035, elapsed: 0.470 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.442, system: 0.379, elapsed: 8.409 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.014, elapsed: 0.603 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.771, system: 1.149, elapsed: 27.119 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.255, system: 2.079, elapsed: 65.113 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [91s/210s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.699, system: 0.065, elapsed: 4.262 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.995, system: 0.330, elapsed: 24.804 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.024, elapsed: 0.491 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.187, system: 0.327, elapsed: 9.330 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.008, elapsed: 0.377 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.879, system: 0.873, elapsed: 40.755 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.736, system: 0.074, elapsed: 3.739 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.895, system: 0.290, elapsed: 19.055 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.030, elapsed: 0.670 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.357, system: 0.387, elapsed: 10.908 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.010, elapsed: 0.346 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.030, system: 0.974, elapsed: 36.379 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.879, system: 0.095, elapsed: 4.270 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.764, system: 0.200, elapsed: 32.292 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.020, elapsed: 0.640 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.135, system: 0.396, elapsed: 14.479 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.018, elapsed: 0.549 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.215, system: 0.316, elapsed: 1.738 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.127, system: 1.334, elapsed: 56.523 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.888, system: 0.122, elapsed: 4.824 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.134, system: 0.412, elapsed: 23.755 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.020, elapsed: 0.513 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.048, system: 0.298, elapsed: 11.342 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.270 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.207, system: 0.641, elapsed: 21.240 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.338, system: 1.552, elapsed: 63.628 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64