Last updated on 2025-08-25 10:49:40 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.34 | 254.04 | 267.38 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.94 | 207.06 | 217.00 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 315.74 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.94 | 308.60 | 323.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.85 | 267.10 | 280.95 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 166.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.544, system: 0.046, elapsed: 2.501 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.152, system: 0.105, elapsed: 12.679 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.013, elapsed: 0.376 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.618, system: 0.177, elapsed: 4.647 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.218, system: 0.368, elapsed: 21.219 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.430, system: 0.029, elapsed: 2.158 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.058, system: 0.075, elapsed: 12.032 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.219 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.779, system: 0.156, elapsed: 5.442 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.228 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.159, system: 0.292, elapsed: 20.822 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.492, system: 0.027, elapsed: 2.364 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.954, system: 0.066, elapsed: 13.414 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.009, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.621, system: 0.170, elapsed: 5.041 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.225 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.131, system: 0.202, elapsed: 1.068 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.165, system: 0.500, elapsed: 23.262 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.441, system: 0.029, elapsed: 2.218 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.847, system: 0.075, elapsed: 13.280 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.013, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.749, system: 0.189, elapsed: 6.324 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.473 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.353, system: 0.470, elapsed: 17.928 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.412, system: 0.810, elapsed: 41.788 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.052, elapsed: 2.080 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.167, system: 0.105, elapsed: 13.604 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.602, system: 0.186, elapsed: 5.140 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.217 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.266, system: 0.381, elapsed: 22.015 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.531, system: 0.032, elapsed: 1.993 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.020, system: 0.078, elapsed: 12.177 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.010, elapsed: 0.194 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.490, system: 0.153, elapsed: 3.823 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.005, elapsed: 0.189 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.913, system: 0.303, elapsed: 19.017 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.481, system: 0.030, elapsed: 1.552 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.970, system: 0.081, elapsed: 12.772 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.478, system: 0.155, elapsed: 4.383 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.013, elapsed: 0.185 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.041, system: 0.237, elapsed: 0.865 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.953, system: 0.556, elapsed: 20.772 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.450, system: 0.028, elapsed: 1.524 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.070, system: 0.080, elapsed: 12.417 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.014, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.619, system: 0.193, elapsed: 7.336 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.362 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.048, system: 0.564, elapsed: 24.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.193, system: 0.911, elapsed: 47.383 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64