CRAN Package Check Results for Package jlme

Last updated on 2025-03-14 12:49:57 CET.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	0.4.1	1.90	24.68	26.58	OK
r-devel-linux-x86_64-debian-gcc	0.4.1	1.66	19.05	20.71	OK
r-devel-linux-x86_64-fedora-clang	0.4.1			75.08	OK
r-devel-linux-x86_64-fedora-gcc	0.4.1			111.19	OK
r-devel-macos-arm64	0.4.1			18.00	OK
r-devel-macos-x86_64	0.4.1			28.00	OK
r-devel-windows-x86_64	0.4.1	8.00	219.00	227.00	OK
r-patched-linux-x86_64	0.4.1				OK
r-release-linux-x86_64	0.4.1	2.28	23.52	25.80	OK
r-release-macos-arm64	0.4.1			22.00	OK
r-release-macos-x86_64	0.4.1			31.00	OK
r-release-windows-x86_64	0.4.1	3.00	454.00	457.00	OK
r-oldrel-macos-arm64	0.4.1				OK
r-oldrel-macos-x86_64	0.4.1			31.00	OK
r-oldrel-windows-x86_64	0.4.1	4.00	94.00	98.00	ERROR

Additional issues

ATLAS noLD OpenBLAS

Check Details

Version: 0.4.1
Check: tests
Result: ERROR Running 'testthat.R' [43s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(jlme) > > test_check("jlme") Starting Julia ... Connecting to Julia TCP server at localhost:11980 ... [1] 11980 Julia version 1.11.3 detected. No active Julia connection. Please call `jlme_setup()`. [1] FALSE julia "C:\\PROGRA~1\\Julia\\bin\\julia.exe" Starting Julia (v1.11.3) ... Activating new project at `D:\temp\2025_03_10_01_50_00_13582\jl_DxHDBJ` Updating registry at `C:\Users\CRAN\.julia\registries\General.toml` Resolving package versions... Installed TimeZones ─ v1.21.3 Timing stopped at: 0.03 0.07 26.27 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 14 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-model.R:11:3'): (code run outside of `test_that()`) ──────────── Error: Evaluation in Julia failed. Original Julia error message: LoadError: `Distributions=31c24e10-a181-5473-b8eb-7969acd0382f` depends on `Test=8dfed614-e22c-5e08-85e1-65c5234f0b40`, but no such entry exists in the manifest. Stacktrace: [1] pkgerror(::String, ::Vararg{String}) @ Pkg.Types C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\Types.jl:68 [2] validate_manifest(julia_version::VersionNumber, manifest_format::VersionNumber, stage1::Dict{String, Vector{Pkg.Types.Stage1}}, other::Dict{String, Any}) @ Pkg.Types C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\manifest.jl:135 [3] Pkg.Types.Manifest(raw::Dict{String, Any}, f_or_io::String) @ Pkg.Types C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\manifest.jl:203 [4] read_manifest(f_or_io::String) @ Pkg.Types C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\manifest.jl:226 [5] Pkg.Types.EnvCache(env::Nothing) @ Pkg.Types C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\Types.jl:373 [6] EnvCache @ C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\Types.jl:351 [inlined] [7] #show_update#170 @ C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\Operations.jl:2549 [inlined] [8] add(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}, new_git::Set{Base.UUID}; allow_autoprecomp::Bool, preserve::Pkg.Types.PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol) @ Pkg.Operations C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\Operations.jl:1467 [9] add @ C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\Operations.jl:1414 [inlined] [10] add(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; preserve::Pkg.Types.PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol, allow_autoprecomp::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\API.jl:312 [11] add(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\API.jl:159 [12] add(pkgs::Vector{Pkg.Types.PackageSpec}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\API.jl:148 [13] add(pkgs::Vector{String}) @ Pkg.API C:\PROGRA~1\Julia\share\julia\stdlib\v1.11\Pkg\src\API.jl:147 [14] top-level scope @ string:4 [15] eval @ .\boot.jl:430 [inlined] [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base .\loading.jl:2734 [17] include_string (repeats 2 times) @ .\loading.jl:2744 [inlined] [18] mainevalcmd(str::String) @ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:150 [19] invokelatest(::Any, ::Any, ::Vararg{Any}; kwargs::@Kwargs{}) @ Base .\essentials.jl:1055 [20] invokelatest(::Any, ::Any, ::Vararg{Any}) @ Base .\essentials.jl:1052 [21] evaluate! @ D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:67 [inlined] [22] evaluate_checked!(call::Main.RConnector.Call, communicator::Main.RConnector.CommunicatoR{Sockets.TCPSocket}) @ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\evaluating.jl:55 [23] serve_repl(sock::Sockets.TCPSocket) @ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\communicating.jl:185 [24] (::Main.RConnector.var"#3#5")() @ Main.RConnector D:\RCompile\CRANpkg\lib\4.3\JuliaConnectoR\Julia\communicating.jl:145 in expression starting at string:4 Backtrace: ▆ 1. ├─base::print(...) at test-model.R:10:1 2. ├─base::system.time(...) 3. └─jlme::jlme_setup(restart = TRUE, verbose = TRUE) at test-model.R:11:3 4. ├─base::do.call(.jlme_setup, params) 5. └─jlme (local) `<fn>`(add = NULL, threads = NULL, verbose = TRUE) 6. └─jlme:::init_proj(add = add, verbose = verbose) 7. └─jlme::jl(...) 8. └─JuliaConnectoR::juliaEval(s_interpolated) 9. └─JuliaConnectoR::juliaCall("RConnector.mainevalcmd", expr) 10. ├─base::tryCatch(...) 11. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 12. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 13. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 14. └─JuliaConnectoR:::doCallJulia(funName, jlargs) 15. └─JuliaConnectoR:::handleCallbacksAndOutput() [ FAIL 1 | WARN 0 | SKIP 0 | PASS 14 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64