Last updated on 2025-12-20 10:50:35 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.0 | 6.99 | 898.44 | 905.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.0 | 4.91 | 610.29 | 615.20 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0 | 13.00 | 1543.65 | 1556.65 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 12.00 | 1358.23 | 1370.23 | OK | |
| r-devel-windows-x86_64 | 1.1.0 | 9.00 | 589.00 | 598.00 | OK | |
| r-patched-linux-x86_64 | 1.1.0 | 6.36 | 856.81 | 863.17 | OK | |
| r-release-linux-x86_64 | 1.1.0 | 7.08 | 855.24 | 862.32 | OK | |
| r-release-macos-arm64 | 1.1.0 | 2.00 | 134.00 | 136.00 | OK | |
| r-release-macos-x86_64 | 1.1.0 | 5.00 | 632.00 | 637.00 | OK | |
| r-release-windows-x86_64 | 1.1.0 | 9.00 | 554.00 | 563.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.0 | 2.00 | 139.00 | 141.00 | NOTE | |
| r-oldrel-macos-x86_64 | 1.1.0 | 5.00 | 359.00 | 364.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.0 | 12.00 | 800.00 | 812.00 | NOTE |
Version: 1.1.0
Check: installed package size
Result: NOTE
installed size is 6.3Mb
sub-directories of 1Mb or more:
doc 4.3Mb
help 1.8Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.1.0
Check: for code/documentation mismatches
Result: WARN
Codoc mismatches from Rd file 'mockCohortCharacteristics.Rd':
mockCohortCharacteristics
Code: function(con = NULL, writeSchema = NULL, numberIndividuals =
10, ..., seed = NULL)
Docs: function(numberIndividuals = 10, ..., source = "local", con =
lifecycle::deprecated(), writeSchema =
lifecycle::deprecated(), seed =
lifecycle::deprecated())
Argument names in docs not in code:
source
Mismatches in argument names (first 3):
Position: 1 Code: con Docs: numberIndividuals
Position: 2 Code: writeSchema Docs: ...
Position: 3 Code: numberIndividuals Docs: source
Mismatches in argument default values:
Name: 'con' Code: NULL Docs: lifecycle::deprecated()
Name: 'writeSchema' Code: NULL Docs: lifecycle::deprecated()
Name: 'seed' Code: NULL Docs: lifecycle::deprecated()
Flavor: r-oldrel-macos-x86_64
Version: 1.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘summarise_characteristics.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Content type 'application/zip' length 6754786 bytes (6.4 MB)
==================================================
downloaded 6.4 MB
Quitting from summarise_characteristics.Rmd:24-49 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'arrow'
---
Backtrace:
▆
1. ├─omock::mockCdmFromDataset(datasetName = "GiBleed", source = "duckdb")
2. │ └─omock:::readTables(tmpFolder, cv)
3. │ └─omock:::castColumns(...)
4. │ ├─dplyr::filter(...)
5. │ ├─dplyr:::filter.data.frame(...)
6. │ │ └─dplyr:::dplyr_quosures(...)
7. │ │ └─rlang::quos(..., .ignore_empty = "all")
8. │ └─base::colnames(x)
9. │ └─base::is.data.frame(x)
10. └─base::loadNamespace(x)
11. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
12. └─base (local) withOneRestart(expr, restarts[[1L]])
13. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_characteristics.Rmd' failed with diagnostics:
there is no package called 'arrow'
--- failed re-building ‘summarise_characteristics.Rmd’
--- re-building ‘summarise_cohort_overlap.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Content type 'application/zip' length 6754786 bytes (6.4 MB)
==================================================
downloaded 6.4 MB
Quitting from summarise_cohort_overlap.Rmd:27-57 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'arrow'
---
Backtrace:
▆
1. ├─omock::mockCdmFromDataset(datasetName = "GiBleed", source = "duckdb")
2. │ └─omock:::readTables(tmpFolder, cv)
3. │ └─omock:::castColumns(...)
4. │ ├─dplyr::filter(...)
5. │ ├─dplyr:::filter.data.frame(...)
6. │ │ └─dplyr:::dplyr_quosures(...)
7. │ │ └─rlang::quos(..., .ignore_empty = "all")
8. │ └─base::colnames(x)
9. │ └─base::is.data.frame(x)
10. └─base::loadNamespace(x)
11. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
12. └─base (local) withOneRestart(expr, restarts[[1L]])
13. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_cohort_overlap.Rmd' failed with diagnostics:
there is no package called 'arrow'
--- failed re-building ‘summarise_cohort_overlap.Rmd’
--- re-building ‘summarise_cohort_timing.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Content type 'application/zip' length 6754786 bytes (6.4 MB)
==================================================
downloaded 6.4 MB
Quitting from summarise_cohort_timing.Rmd:25-55 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'arrow'
---
Backtrace:
▆
1. ├─omock::mockCdmFromDataset(datasetName = "GiBleed", source = "duckdb")
2. │ └─omock:::readTables(tmpFolder, cv)
3. │ └─omock:::castColumns(...)
4. │ ├─dplyr::filter(...)
5. │ ├─dplyr:::filter.data.frame(...)
6. │ │ └─dplyr:::dplyr_quosures(...)
7. │ │ └─rlang::quos(..., .ignore_empty = "all")
8. │ └─base::colnames(x)
9. │ └─base::is.data.frame(x)
10. └─base::loadNamespace(x)
11. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
12. └─base (local) withOneRestart(expr, restarts[[1L]])
13. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_cohort_timing.Rmd' failed with diagnostics:
there is no package called 'arrow'
--- failed re-building ‘summarise_cohort_timing.Rmd’
--- re-building ‘summarise_large_scale_characteristics.Rmd’ using rmarkdown
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Content type 'application/zip' length 6754786 bytes (6.4 MB)
==================================================
downloaded 6.4 MB
Quitting from summarise_large_scale_characteristics.Rmd:31-48 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'arrow'
---
Backtrace:
▆
1. ├─omock::mockCdmFromDataset(datasetName = "GiBleed", source = "duckdb")
2. │ └─omock:::readTables(tmpFolder, cv)
3. │ └─omock:::castColumns(...)
4. │ ├─dplyr::filter(...)
5. │ ├─dplyr:::filter.data.frame(...)
6. │ │ └─dplyr:::dplyr_quosures(...)
7. │ │ └─rlang::quos(..., .ignore_empty = "all")
8. │ └─base::colnames(x)
9. │ └─base::is.data.frame(x)
10. └─base::loadNamespace(x)
11. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
12. └─base (local) withOneRestart(expr, restarts[[1L]])
13. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_large_scale_characteristics.Rmd' failed with diagnostics:
there is no package called 'arrow'
--- failed re-building ‘summarise_large_scale_characteristics.Rmd’
SUMMARY: processing the following files failed:
‘summarise_characteristics.Rmd’ ‘summarise_cohort_overlap.Rmd’
‘summarise_cohort_timing.Rmd’
‘summarise_large_scale_characteristics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-x86_64