7e20b4e78ab48a8a5a611f2ff04d96b1 *DESCRIPTION
7761cf66d0f091fa5da6ad4644933c9f *INDEX
d8022b39e9de0096e98dff70869bfc54 *Meta/Rd.rds
8a7e4b46c25c00f120bed7ab8e7cf69b *Meta/data.rds
97f39cfa069205fc947ab1e51ea53d4e *Meta/features.rds
5a98af417da0850d14cc4a7c9e58758e *Meta/hsearch.rds
dd407187a35ae454af32ae09d716e679 *Meta/links.rds
a4aac66aeef7e8919f8651b5e3b1ffd3 *Meta/nsInfo.rds
326cd16bb783ee8e7a958d66a3a54c02 *Meta/package.rds
a6f6d1b68d4608976dac8e2765668ec1 *Meta/vignette.rds
4760b8cea42bdf9e2bd0ee4e5ffa14b2 *NAMESPACE
40a1eb240975786ef2a2e3999f6741a5 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/chicane
d7d728c6d109dc8b100b94de10b37d24 *R/chicane.rdb
a05cd657d23f7c40f94695420c6ef9ff *R/chicane.rdx
604e8d443a30b6b19b9a6287000cca9c *bin/prepare_bam.sh
a33f9b72db91338d16ea1d680957a46f *data/Rdata.rdb
c72e949b04641db9dd727e5d40f2c646 *data/Rdata.rds
3212b7a25d55e288bb718ed60d8260b2 *data/Rdata.rdx
59b6fcb114f4232e12af6652c9b373c0 *doc/Getting_Started.R
515585c33dedb19a8f1f7c748ebef7e3 *doc/Getting_Started.Rmd
cd901cdd7dc1015f772e8c1e99937fda *doc/Getting_Started.html
e4460047fff31cb2537ab0b3543ac7ce *doc/Visualising_Interactions.R
c1db5ada2e3d987e7360de934fd0c85b *doc/Visualising_Interactions.Rmd
92aba25b150715f36816020f37b7f739 *doc/Visualising_Interactions.html
935f2f13f4d10a584faa1902a01aa922 *doc/index.html
9694870bc2e4418cc0da3ff1268baefa *extdata/2q35.bed
8e0324f0ea4ef14fc866fdc9d6617c0c *extdata/Bre80_2q35.bam
77de0629d4337e8589101295e928d2b0 *extdata/GRCh38_HindIII_chr2.bed.gz
4669a4755d16f56edef27d94e2c48369 *extdata/HiCUP_digest_example.txt
08ac28976f25554458f20b220d99902d *extdata/T47D_2q35_filtered_chicane_calls.txt
2f808b14e72d467223a8e5cd6b134458 *extdata/T47D_chr2_CTCF.bed.gz
da9476d831a0e737b7db65ed4153a0ec *extdata/gencode_2q35.gtf
ee163524629ee726340f7e040152ecf2 *extdata/read_count_test.bam
06e7e9ddf38045653625d5e85f9666aa *extdata/read_count_test_cis.bam
b26196c3fcf6126f066cda2dc3a39532 *help/AnIndex
7cc4f85189ebe8536580e787cc26d1a4 *help/aliases.rds
bc2c65938f8a963ad16a3f1e669a15d1 *help/chicane.rdb
82d83fe2780c1e755e13e0e48b50b56a *help/chicane.rdx
00aeef27bf97510ce34e9e7469c181ec *help/paths.rds
b1c249449fc4960a485ff59c8065592e *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
