scanMiRData

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see scanMiRData.

miRNA Affinity models for the scanMiR package


Bioconductor version: 3.17

This package contains companion data to the scanMiR package. It contains `KdModel` (miRNA 12-mer binding affinity models) collections corresponding to all human, mouse and rat mirbase miRNAs. See the scanMiR package for details.

Author: Pierre-Luc Germain [aut] , Michael Soutschek [aut], Fridolin Gross [cre, aut]

Maintainer: Fridolin Gross <fridolin.gross at hest.ethz.ch>

Citation (from within R, enter citation("scanMiRData")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scanMiRData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("scanMiRData")
scanMiRData HTML R Script
Reference Manual PDF

Details

biocViews ExperimentData, Homo_sapiens_Data, Mus_musculus_Data, Rattus_norvegicus_Data, miRNAData
Version 1.6.0
License GPL-3
Depends R (>= 4.0)
Imports scanMiR, utils
System Requirements
URL
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Suggests knitr, rmarkdown, BiocStyle
Linking To
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Depends On Me
Imports Me scanMiRApp
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package scanMiRData_1.6.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/scanMiRData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/scanMiRData
Package Short Url https://bioconductor.org/packages/scanMiRData/
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