TCGAMethylation450k

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see TCGAMethylation450k.

The Cancer Genome Atlas Illumina 450k methylation example data


Bioconductor version: 3.17

The Cancer Genome Atlas (TCGA) is applying genomics technologies to over 20 different types of cancer. This package contains a small set of 450k array data in idat format.

Author: Sean Davis

Maintainer: Sean Davis <sdavis2 at mail.nih.gov>

Citation (from within R, enter citation("TCGAMethylation450k")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TCGAMethylation450k")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews CancerData, ExperimentData, Genome, MethylationArrayData
Version 1.36.0
License GPL-2
Depends
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me methylumi
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TCGAMethylation450k_1.36.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/TCGAMethylation450k
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TCGAMethylation450k
Package Short Url https://bioconductor.org/packages/TCGAMethylation450k/
Package Downloads Report Download Stats