CNORode
This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see CNORode.
ODE add-on to CellNOptR
Bioconductor version: 3.17
Logic based ordinary differential equation (ODE) add-on to CellNOptR.
Author: David Henriques, Thomas Cokelaer, Attila Gabor, Federica Eduati, Enio Gjerga
Maintainer: Attila Gabor <attila.gabor at uni-heidelberg.de>
Citation (from within R, enter
citation("CNORode")
):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CNORode")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CNORode")
Training Signalling Pathway Maps to Biochemical Data with Logic-Based Ordinary Differential Equations | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Bioinformatics, CellBasedAssays, CellBiology, ImmunoOncology, Proteomics, Software, TimeCourse |
Version | 1.42.0 |
In Bioconductor since | BioC 2.11 (R-2.15) (11.5 years) |
License | GPL-2 |
Depends | CellNOptR, genalg, knitr |
Imports | |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | MEIGOR, doParallel, foreach |
Depends On Me | MEIGOR |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | CNORode_1.42.0.tar.gz |
Windows Binary | CNORode_1.42.0.zip (64-bit only) |
macOS Binary (x86_64) | CNORode_1.42.0.tgz |
macOS Binary (arm64) | CNORode_1.42.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/CNORode |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/CNORode |
Bioc Package Browser | https://code.bioconductor.org/browse/CNORode/ |
Package Short Url | https://bioconductor.org/packages/CNORode/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.17 | Source Archive |